Xylose Metabolism and the Effect of Oxidative Stress on Lipid and Carotenoid Production in Rhodotorula toruloides: Insights for Future Biorefinery

C/N ratio and carbon source-dependent lipid production profiling in Rhodotorula toruloides

(2020) Helberth Júnnior Santos Lopes et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Rhodotorula toruloides Single Cell Oil Production Using Eucalyptus urograndis Hemicellulose Hydrolysate as a Carbon Source

(2020) Helberth Júnnior Santos Lopes et al.   Energies

g:Profiler: a web server for functional enrichment analysis and conversions of gene lists (2019 update)

(2019) Uku Raudvere et al.   NUCLEIC ACIDS RESEARCH

Proteome analysis of xylose metabolism in Rhodotorula toruloides during lipid production

(2019) Ievgeniia A. Tiukova et al.   Biotechnology for Biofuels

Genome‐scale model of Rhodotorula toruloides metabolism

(2019) Ievgeniia A. Tiukova et al.   BIOTECHNOLOGY AND BIOENGINEERING

Simultaneously enhanced intracellular lipogenesis and β-carotene biosynthesis of Rhodotorula glutinis by light exposure with sodium acetate as the substrate

(2019) Guiping Gong et al.   BIORESOURCE TECHNOLOGY

Comprehensive analysis of a metabolic model for lipid production in Rhodosporidium toruloides

(2018) María Teresita Castañeda et al.   JOURNAL OF BIOTECHNOLOGY

Torulene and torularhodin: “new” fungal carotenoids for industry?

(2018) Anna M. Kot et al.   Microbial Cell Factories

The Engineering Potential of Rhodosporidium toruloides as a Workhorse for Biotechnological Applications

(2018) Young-Kyoung Park et al.   TRENDS IN BIOTECHNOLOGY

Expression of phosphotransacetylase in Rhodosporidium toruloides leading to improved cell growth and lipid production

(2018) Xiaobing Yang et al.   RSC Advances

Functional genomics of lipid metabolism in the oleaginous yeast Rhodosporidium toruloides

(2018) Samuel T Coradetti et al.   eLife

Oleaginous yeast as a component in fish feed

(2018) Johanna Blomqvist et al.   Scientific Reports

RAVEN 2.0: A versatile toolbox for metabolic network reconstruction and a case study on Streptomyces coelicolor

(2018) Hao Wang et al.   PLoS Computational Biology

Improving the phenotype predictions of a yeast genome‐scale metabolic model by incorporating enzymatic constraints

(2017) Benjamín J Sánchez et al.   Molecular Systems Biology

Microbial oil production in sugarcane bagasse hemicellulosic hydrolysate without nutrient supplementation by a Rhodosporidium toruloides adapted strain

(2017) Nemailla Bonturi et al.   PROCESS BIOCHEMISTRY

Principles of cellular resource allocation revealed by condition-dependent proteome profiling

(2017) Eyal Metzl-Raz et al.   eLife

Reactive Oxygen Species-Mediated Cellular Stress Response and Lipid Accumulation in Oleaginous Microorganisms: The State of the Art and Future Perspectives

(2017) Kun Shi et al.   Frontiers in Microbiology

Absolute Quantification of Protein and mRNA Abundances Demonstrate Variability in Gene-Specific Translation Efficiency in Yeast

(2017) Petri-Jaan Lahtvee et al.   Cell Systems

The suppression of torulene and torularhodin treatment on the growth of PC-3 xenograft prostate tumors

(2016) Chao Du et al.   BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS

Metabolic Trade-offs in Yeast are Caused by F1F0-ATP synthase

(2016) Avlant Nilsson et al.   Scientific Reports

Single Cell Oil Producing Yeasts Lipomyces starkeyi and Rhodosporidium toruloides: Selection of Extraction Strategies and Biodiesel Property Prediction

(2015) Nemailla Bonturi et al.   Energies

The oxidative pentose phosphate pathway is the primary source of NADPH for lipid overproduction from glucose in Yarrowia lipolytica

(2015) Thomas M. Wasylenko et al.   METABOLIC ENGINEERING

Acute Activation of Oxidative Pentose Phosphate Pathway as First-Line Response to Oxidative Stress in Human Skin Cells

(2015) Andreas Kuehne et al.   MOLECULAR CELL

2016 update of the PRIDE database and its related tools

(2015) Juan Antonio Vizcaíno et al.   NUCLEIC ACIDS RESEARCH

Lipid accumulation and biosynthesis genes response of the oleaginous Chlorella pyrenoidosa under three nutrition stressors

(2014) Jianhua Fan et al.   Biotechnology for Biofuels

Applications of computational modeling in metabolic engineering of yeast

(2014) Eduard J. Kerkhoven et al.   FEMS YEAST RESEARCH

Metabolomic Profiling of Rhodosporidium toruloides Grown on Glycerol for Carotenoid Production during Different Growth Phases

(2014) Jaslyn Jie Lin Lee et al.   JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY

Biotechnological production of carotenoids by yeasts: an overview

(2014) Luis Mata-Gómez et al.   Microbial Cell Factories

Emergence of robust growth laws from optimal regulation of ribosome synthesis

(2014) M. Scott et al.   Molecular Systems Biology

Oxidative Stress Is a Mediator for Increased Lipid Accumulation in a Newly Isolated Dunaliella salina Strain

(2014) Kaan Yilancioglu et al.   PLoS One

Enriching the gene set analysis of genome-wide data by incorporating directionality of gene expression and combining statistical hypotheses and methods

(2013) Leif Väremo et al.   NUCLEIC ACIDS RESEARCH

Relationship among carotenoid production, copper bioremediation and oxidative stress in Rhodotorula mucilaginosa RCL-11

(2013) Verónica Irazusta et al.   PROCESS BIOCHEMISTRY

Formation of triacylglycerol in Nitzschia closterium f. minutissima under nitrogen limitation and possible physiological and biochemical mechanisms

(2012) Wenhua Liu et al.   JOURNAL OF EXPERIMENTAL MARINE BIOLOGY AND ECOLOGY

A multi-omic map of the lipid-producing yeast Rhodosporidium toruloides

(2012) Zhiwei Zhu et al.   Nature Communications

Comparative proteomic analysis ofRhodosporidium toruloidesduring lipid accumulation

(2009) Hongwei Liu et al.   YEAST

MaxQuant enables high peptide identification rates, individualized p.p.b.-range mass accuracies and proteome-wide protein quantification

(2008) Jürgen Cox et al.   NATURE BIOTECHNOLOGY