Fine Particulate Matter Exposure Alters Pulmonary Microbiota Composition and Aggravates Pneumococcus-Induced Lung Pathogenesis

Exposure to diesel exhaust particles increases susceptibility to invasive pneumococcal disease

(2020) Rebecca K. Shears et al.   JOURNAL OF ALLERGY AND CLINICAL IMMUNOLOGY

PM2.5 exposure perturbs lung microbiome and its metabolic profile in mice

(2020) Jingli Li et al.   SCIENCE OF THE TOTAL ENVIRONMENT

PICRUSt2 for prediction of metagenome functions

(2020) Gavin M. Douglas et al.   NATURE BIOTECHNOLOGY

PM2.5 impairs macrophage functions to exacerbate pneumococcus-induced pulmonary pathogenesis

(2020) Yu-Wen Chen et al.   Particle and Fibre Toxicology

Respiratory exposure to PM2.5 soluble extract disrupts mucosal barrier function and promotes the development of experimental asthma

(2020) Chen Zhao et al.   SCIENCE OF THE TOTAL ENVIRONMENT

High-Level PM2.5/PM10 Exposure Is Associated With Alterations in the Human Pharyngeal Microbiota Composition

(2019) Tian Qin et al.   Frontiers in Microbiology

Dysregulated Lung Commensal Bacteria Drive Interleukin-17B Production to Promote Pulmonary Fibrosis through Their Outer Membrane Vesicles

(2019) Daping Yang et al.   IMMUNITY

The respiratory microbiota: new insights into pulmonary tuberculosis

(2019) Setegn Eshetie et al.   BMC INFECTIOUS DISEASES

Farm-like indoor microbiota in non-farm homes protects children from asthma development

(2019) Pirkka V. Kirjavainen et al.   NATURE MEDICINE

Microbial Composition of the Human Nasopharynx Varies According to Influenza Virus Type and Vaccination Status

(2019) Tao Ding et al.   mBio

Gut microbiota partially mediates the effects of fine particulate matter on type 2 diabetes: Evidence from a population-based epidemiological study

(2019) Tao Liu et al.   ENVIRONMENT INTERNATIONAL

Age-Associated Microbial Dysbiosis Promotes Intestinal Permeability, Systemic Inflammation, and Macrophage Dysfunction

(2018) Netusha Thevaranjan et al.   Cell Host & Microbe

Inhalational exposure to particulate matter air pollution alters the composition of the gut microbiome

(2018) Ece A. Mutlu et al.   ENVIRONMENTAL POLLUTION

Short-term particulate matter exposure influences nasal microbiota in a population of healthy subjects

(2018) Jacopo Mariani et al.   ENVIRONMENTAL RESEARCH

Exposure to concentrated ambient PM2.5 alters the composition of gut microbiota in a murine model

(2018) Wanjun Wang et al.   Particle and Fibre Toxicology

PM2.5-induced oxidative stress increases intercellular adhesion molecule-1 expression in lung epithelial cells through the IL-6/AKT/STAT3/NF-κB-dependent pathway

(2018) Chen-Wei Liu et al.   Particle and Fibre Toxicology

Oral Microbiota Community Dynamics Associated With Oral Squamous Cell Carcinoma Staging

(2018) Chia-Yu Yang et al.   Frontiers in Microbiology

Microbiome and Allergic Diseases

(2018) Mariona Pascal et al.   Frontiers in Immunology

Airway microbiome is associated with respiratory functions and responses to ambient particulate matter exposure

(2018) Liping Wang et al.   ECOTOXICOLOGY AND ENVIRONMENTAL SAFETY

Simple statistical identification and removal of contaminant sequences in marker-gene and metagenomics data

(2018) Nicole M. Davis et al.   Microbiome

Antrocin Sensitizes Prostate Cancer Cells to Radiotherapy through Inhibiting PI3K/AKT and MAPK Signaling Pathways

(2018) Yu-An Chen et al.   Cancers

The sialateO-acetylesterase EstA from gutBacteroidetesspecies enables sialidase-mediated cross-species foraging of 9-O-acetylated sialoglycans

(2017) Lloyd S. Robinson et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Invasive pneumococcal disease caused by ceftriaxone-resistant Streptococcus pneumoniae in Taiwan

(2017) Hao-Yuan Lee et al.   JOURNAL OF MICROBIOLOGY IMMUNOLOGY AND INFECTION

The sinonasal microbiota, neural signaling, and depression in chronic rhinosinusitis

(2017) Michael Hoggard et al.   International Forum of Allergy & Rhinology

Differential Utilization of Basic Proline-Rich Glycoproteins during Growth of Oral Bacteria in Saliva

(2016) Yuan Zhou et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

The health effects of ambient PM2.5 and potential mechanisms

(2016) Shaolong Feng et al.   ECOTOXICOLOGY AND ENVIRONMENTAL SAFETY

Co-colonization by Streptococcus pneumoniae and Staphylococcus aureus in the throat during acute respiratory illnesses

(2016) V. DE LASTOURS et al.   EPIDEMIOLOGY AND INFECTION

Cigarette Smoke Attenuates the Nasal Host Response to Streptococcus pneumoniae and Predisposes to Invasive Pneumococcal Disease in Mice

(2016) Pamela Shen et al.   INFECTION AND IMMUNITY

DADA2: High-resolution sample inference from Illumina amplicon data

(2016) Benjamin J Callahan et al.   NATURE METHODS

Evidence of microbiota dysbiosis in chronic rhinosinusitis

(2016) Michael Hoggard et al.   International Forum of Allergy & Rhinology

Aeroparticles, Composition, and Lung Diseases

(2016) Carlos I. Falcon-Rodriguez et al.   Frontiers in Immunology

Particulate Matter Composition and Respiratory Health

(2015) Ulrike Gehring et al.   EPIDEMIOLOGY

Staphylococcus aureus and the ecology of the nasal microbiome

(2015) C. M. Liu et al.   Science Advances

Conducting a Microbiome Study

(2014) Julia K. Goodrich et al.   CELL

Glycans in pathogenic bacteria – potential for targeted covalent therapeutics and imaging agents

(2014) Van N. Tra et al.   CHEMICAL COMMUNICATIONS

The cross talk between microbiota and the immune system: metabolites take center stage

(2014) Hagit Shapiro et al.   CURRENT OPINION IN IMMUNOLOGY

The potential role of lung microbiota in lung cancer attributed to household coal burning exposures

(2014) H. Dean Hosgood et al.   ENVIRONMENTAL AND MOLECULAR MUTAGENESIS

The effects of PM2.5 and its components from indoor and outdoor sources on cough and wheeze symptoms in asthmatic children

(2014) Rima Habre et al.   Journal of Exposure Science and Environmental Epidemiology

Zinc oxide nanoparticles impair bacterial clearance by macrophages

(2014) Chia-Der Lin et al.   Nanomedicine

Development of a Dual-Index Sequencing Strategy and Curation Pipeline for Analyzing Amplicon Sequence Data on the MiSeq Illumina Sequencing Platform

(2013) James J. Kozich et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

The Airway Microbiome and Disease

(2013) Benjamin J. Marsland et al.   CHEST

phyloseq: An R Package for Reproducible Interactive Analysis and Graphics of Microbiome Census Data

(2013) Paul J. McMurdie et al.   PLoS One

Long-term Exposure to PM 2.5 and Incidence of Acute Myocardial Infarction

(2012) Jaime Madrigano et al.   ENVIRONMENTAL HEALTH PERSPECTIVES

Metabolism of sugars by genetically diverse species of oral Leptotrichia

(2011) J. Thompson et al.   Molecular Oral Microbiology

Metagenomic biomarker discovery and explanation

(2011) Nicola Segata et al.   GENOME BIOLOGY

Long-Term Exposure to Ambient Air Pollution and Risk of Hospitalization with Community-acquired Pneumonia in Older Adults

(2009) Binod Neupane et al.   AMERICAN JOURNAL OF RESPIRATORY AND CRITICAL CARE MEDICINE

Regulation of inflammatory responses by gut microbiota and chemoattractant receptor GPR43

(2009) Kendle M. Maslowski et al.   NATURE

Severe Pneumonia with Leptotrichia sp. Detected Predominantly in Bronchoalveolar Lavage Fluid by Use of 16S rRNA Gene Sequencing Analysis

(2008) T. Kawanami et al.   JOURNAL OF CLINICAL MICROBIOLOGY