Term Matrix: a novel Gene Ontology annotation quality control system based on ontology term co-annotation patterns

Gene Ontology Curation of Neuroinflammation Biology Improves the Interpretation of Alzheimer’s Disease Gene Expression Data

(2020) Barbara Kramarz et al.   JOURNAL OF ALZHEIMERS DISEASE

Hidden in plain sight: what remains to be discovered in the eukaryotic proteome?

(2019) Valerie Wood et al.   Open Biology

Genetic meta-analysis of diagnosed Alzheimer’s disease identifies new risk loci and implicates Aβ, tau, immunity and lipid processing

(2019) Brian W. Kunkle et al.   NATURE GENETICS

Gene Ontology Causal Activity Modeling (GO-CAM) moves beyond GO annotations to structured descriptions of biological functions and systems

(2019) Paul D. Thomas et al.   NATURE GENETICS

PomBase 2018: user-driven reimplementation of the fission yeast database provides rapid and intuitive access to diverse, interconnected information

(2018) Antonia Lock et al.   NUCLEIC ACIDS RESEARCH

UniProt: a worldwide hub of protein knowledge

(2018)   NUCLEIC ACIDS RESEARCH

ECO, the Evidence & Conclusion Ontology: community standard for evidence information

(2018) Michelle Giglio et al.   NUCLEIC ACIDS RESEARCH

The Gene Ontology Resource: 20 years and still GOing strong

(2018)   NUCLEIC ACIDS RESEARCH

Destabilization of the replication fork protection complex disrupts meiotic chromosome segregation

(2017) Wilber Escorcia et al.   MOLECULAR BIOLOGY OF THE CELL

Dead simple OWL design patterns

(2017) David Osumi-Sutherland et al.   Journal of Biomedical Semantics

Expansion of the Gene Ontology knowledgebase and resources

(2016)   NUCLEIC ACIDS RESEARCH

UniProt: the universal protein knowledgebase

(2016)   NUCLEIC ACIDS RESEARCH

Ensembl comparative genomics resources

(2016) Javier Herrero et al.   Database-The Journal of Biological Databases and Curation

Proteogenomics of the human hippocampus: The road ahead

(2015) Myoung-Goo Kang et al.   BIOCHIMICA ET BIOPHYSICA ACTA-PROTEINS AND PROTEOMICS

A method for increasing expressivity of Gene Ontology annotations using a compositional approach

(2014) Rachael P Huntley et al.   BMC BIOINFORMATICS

The InterPro protein families database: the classification resource after 15 years

(2014) Alex Mitchell et al.   NUCLEIC ACIDS RESEARCH

A guide to best practices for Gene Ontology (GO) manual annotation

(2013) R. Balakrishnan et al.   Database-The Journal of Biological Databases and Curation

A genome-wide resource of cell cycle and cell shape genes of fission yeast

(2013) J. Hayles et al.   Open Biology

Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation

(2012) S. Burge et al.   Database-The Journal of Biological Databases and Curation

Translational Control of Cell Division by Elongator

(2012) Fanelie Bauer et al.   Cell Reports

Quality of Computationally Inferred Gene Ontology Annotations

(2012) Nives Škunca et al.   PLoS Computational Biology

Transcriptomic analyses of murine resolution-phase macrophages

(2011) M. J. Stables et al.   BLOOD

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium

(2011) P. Gaudet et al.   BRIEFINGS IN BIOINFORMATICS

The Impact of Focused Gene Ontology Curation of Specific Mammalian Systems

(2011) Yasmin Alam-Faruque et al.   PLoS One

Integral membrane proteins Brr6 and Apq12 link assembly of the nuclear pore complex to lipid homeostasis in the endoplasmic reticulum

(2009) C. A. Hodge et al.   JOURNAL OF CELL SCIENCE

AmiGO: online access to ontology and annotation data

(2008) Seth Carbon et al.   BIOINFORMATICS