Molecular simulations unravel the molecular principles that mediate selective permeability of carboxysome shell protein
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Title
Molecular simulations unravel the molecular principles that mediate selective permeability of carboxysome shell protein
Authors
Keywords
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Journal
Scientific Reports
Volume 10, Issue 1, Pages -
Publisher
Springer Science and Business Media LLC
Online
2020-10-15
DOI
10.1038/s41598-020-74536-5
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Note: Only part of the references are listed.- Decoding the stoichiometric composition and organisation of bacterial metabolosomes
- (2020) Mengru Yang et al. Nature Communications
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- (2019) Matthew Faulkner et al. Nanoscale Research Letters
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- (2018) Cheryl A. Kerfeld et al. NATURE REVIEWS MICROBIOLOGY
- A Generic Self-Assembly Process in Microcompartments and Synthetic Protein Nanotubes
- (2018) Ismail Uddin et al. Small
- Engineering and Modulating Functional Cyanobacterial CO2-Fixing Organelles
- (2018) Yi Fang et al. Frontiers in Plant Science
- Selective Permeability of Carboxysome Shell Pores to Anionic Molecules
- (2018) Paween Mahinthichaichan et al. JOURNAL OF PHYSICAL CHEMISTRY B
- Roles of RbcX in Carboxysome Biosynthesis in the Cyanobacterium Synechococcus elongatus PCC7942
- (2018) Fang Huang et al. PLANT PHYSIOLOGY
- Constant-pH Molecular Dynamics Simulations for Large Biomolecular Systems
- (2017) Brian K. Radak et al. Journal of Chemical Theory and Computation
- Crystal structures of β-carboxysome shell protein CcmP: ligand binding correlates with the closed or open central pore
- (2017) Anna M Larsson et al. JOURNAL OF EXPERIMENTAL BOTANY
- Molecular Dynamics Simulations of Selective Metabolite Transport across the Propanediol Bacterial Microcompartment Shell
- (2017) Jiyong Park et al. JOURNAL OF PHYSICAL CHEMISTRY B
- Dissecting the Native Architecture and Dynamics of Cyanobacterial Photosynthetic Machinery
- (2017) Selene Casella et al. Molecular Plant
- Direct characterization of the native structure and mechanics of cyanobacterial carboxysomes
- (2017) Matthew Faulkner et al. Nanoscale
- Assembly principles and structure of a 6.5-MDa bacterial microcompartment shell
- (2017) Markus Sutter et al. SCIENCE
- Assembly, function and evolution of cyanobacterial carboxysomes
- (2016) Cheryl A Kerfeld et al. CURRENT OPINION IN PLANT BIOLOGY
- Light Modulates the Biosynthesis and Organization of Cyanobacterial Carbon Fixation Machinery through Photosynthetic Electron Flow
- (2016) Yaqi Sun et al. PLANT PHYSIOLOGY
- Bacterial microcompartments: widespread prokaryotic organelles for isolation and optimization of metabolic pathways
- (2015) Thomas A. Bobik et al. MOLECULAR MICROBIOLOGY
- Visualization of Bacterial Microcompartment Facet Assembly Using High-Speed Atomic Force Microscopy
- (2015) Markus Sutter et al. NANO LETTERS
- Transgenic tobacco plants with improved cyanobacterial Rubisco expression but no extra assembly factors grow at near wild-type rates if provided with elevated CO2
- (2015) Alessandro Occhialini et al. PLANT JOURNAL
- Selective molecular transport through the protein shell of a bacterial microcompartment organelle
- (2015) Chiranjit Chowdhury et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Bacterial microcompartments and the modular construction of microbial metabolism
- (2015) Cheryl A. Kerfeld et al. TRENDS IN MICROBIOLOGY
- The near-atomic cryoEM structure of a flexible filamentous plant virus shows homology of its coat protein with nucleoproteins of animal viruses
- (2015) Xabier Agirrezabala et al. eLife
- Structural Disorder in Viral Proteins
- (2014) Bin Xue et al. CHEMICAL REVIEWS
- Free Energies from Dynamic Weighted Histogram Analysis Using Unbiased Markov State Model
- (2014) Edina Rosta et al. Journal of Chemical Theory and Computation
- Assembly of Robust Bacterial Microcompartment Shells Using Building Blocks from an Organelle of Unknown Function
- (2014) Jonathan K. Lassila et al. JOURNAL OF MOLECULAR BIOLOGY
- A faster Rubisco with potential to increase photosynthesis in crops
- (2014) Myat T. Lin et al. NATURE
- β-Carboxysomal proteins assemble into highly organized structures inNicotianachloroplasts
- (2014) Myat T. Lin et al. PLANT JOURNAL
- Engineering Bacterial Microcompartment Shells: Chimeric Shell Proteins and Chimeric Carboxysome Shells
- (2014) Fei Cai et al. ACS Synthetic Biology
- The Structure of CcmP, a Tandem Bacterial Microcompartment Domain Protein from the β-Carboxysome, Forms a Subcompartment Within a Microcompartment
- (2013) Fei Cai et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- PTRAJ and CPPTRAJ: Software for Processing and Analysis of Molecular Dynamics Trajectory Data
- (2013) Daniel R. Roe et al. Journal of Chemical Theory and Computation
- CHARMM36 all-atom additive protein force field: Validation based on comparison to NMR data
- (2013) Jing Huang et al. JOURNAL OF COMPUTATIONAL CHEMISTRY
- Functions, Compositions, and Evolution of the Two Types of Carboxysomes: Polyhedral Microcompartments That Facilitate CO2 Fixation in Cyanobacteria and Some Proteobacteria
- (2013) B. D. Rae et al. MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS
- Control of electron transport routes through redox-regulated redistribution of respiratory complexes
- (2012) L.-N. Liu et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- The protein shells of bacterial microcompartment organelles
- (2011) Todd O Yeates et al. CURRENT OPINION IN STRUCTURAL BIOLOGY
- SwissDock, a protein-small molecule docking web service based on EADock DSS
- (2011) A. Grosdidier et al. NUCLEIC ACIDS RESEARCH
- Comparative analysis of carboxysome shell proteins
- (2011) James N. Kinney et al. PHOTOSYNTHESIS RESEARCH
- Modularity of a carbon-fixing protein organelle
- (2011) W. Bonacci et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Features and development ofCoot
- (2010) P. Emsley et al. ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY
- The Carboxysome Shell Is Permeable to Protons
- (2010) B. B. Menon et al. JOURNAL OF BACTERIOLOGY
- Structure and Mechanisms of a Protein-Based Organelle in Escherichia coli
- (2010) S. Tanaka et al. SCIENCE
- Identification and Structural Analysis of a Novel Carboxysome Shell Protein with Implications for Metabolite Transport
- (2009) Michael G. Klein et al. JOURNAL OF MOLECULAR BIOLOGY
- The Pentameric Vertex Proteins Are Necessary for the Icosahedral Carboxysome Shell to Function as a CO2 Leakage Barrier
- (2009) Fei Cai et al. PLoS One
- Two-dimensional crystals of carboxysome shell proteins recapitulate the hexagonal packing of three-dimensional crystals
- (2009) Kelly A. Dryden et al. PROTEIN SCIENCE
- CO2Fixation Kinetics ofHalothiobacillus neapolitanusMutant Carboxysomes Lacking Carbonic Anhydrase Suggest the Shell Acts as a Diffusional Barrier for CO2
- (2008) Zhicheng Dou et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- CHARMM-GUI: A web-based graphical user interface for CHARMM
- (2008) Sunhwan Jo et al. JOURNAL OF COMPUTATIONAL CHEMISTRY
- Protein-based organelles in bacteria: carboxysomes and related microcompartments
- (2008) Todd O. Yeates et al. NATURE REVIEWS MICROBIOLOGY
- Atomic-Level Models of the Bacterial Carboxysome Shell
- (2008) S. Tanaka et al. SCIENCE
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