High molecular weight DNA assembly in vivo for synthetic biology applications
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Title
High molecular weight DNA assembly in vivo for synthetic biology applications
Authors
Keywords
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Journal
CRITICAL REVIEWS IN BIOTECHNOLOGY
Volume 37, Issue 3, Pages 277-286
Publisher
Informa UK Limited
Online
2016-02-11
DOI
10.3109/07388551.2016.1141394
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Note: Only part of the references are listed.- A novel method to produce armored double-stranded DNA by encapsulation of MS2 viral capsids
- (2015) Lei Zhang et al. APPLIED MICROBIOLOGY AND BIOTECHNOLOGY
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- (2015) Vladimir N Noskov et al. BIOLOGICAL PROCEDURES ONLINE
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- A series of conditional shuttle vectors for targeted genomic integration in budding yeast
- (2015) Chia-Ching Chou et al. FEMS YEAST RESEARCH
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- (2015) Yo Suzuki et al. GENOME RESEARCH
- Pseudomonas aeruginosa essentials: an update on investigation of essential genes
- (2015) Mario Juhas MICROBIOLOGY-SGM
- Biocontainment of genetically modified organisms by synthetic protein design
- (2015) Daniel J. Mandell et al. NATURE
- Bacillus subtilisRecO and SsbA are crucial for RecA-mediated recombinational DNA repair
- (2015) Begoña Carrasco et al. NUCLEIC ACIDS RESEARCH
- Identification and Validation of Novel Chromosomal Integration and Expression Loci in Escherichia coli Flagellar Region 1
- (2015) Mario Juhas et al. PLoS One
- Essential genome ofPseudomonas aeruginosain cystic fibrosis sputum
- (2015) Keith H. Turner et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- General and condition-specific essential functions ofPseudomonas aeruginosa
- (2015) Samuel A. Lee et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Cell Biology of Mitotic Recombination
- (2015) Michael Lisby et al. Cold Spring Harbor Perspectives in Biology
- Method of preparing an equimolar DNA mixture for one-step DNA assembly of over 50 fragments
- (2015) Kenji Tsuge et al. Scientific Reports
- BASIC: A New Biopart Assembly Standard for Idempotent Cloning Provides Accurate, Single-Tier DNA Assembly for Synthetic Biology
- (2015) Marko Storch et al. ACS Synthetic Biology
- CasEMBLR: Cas9-Facilitated Multiloci Genomic Integration of in Vivo Assembled DNA Parts in Saccharomyces cerevisiae
- (2015) Tadas Jakočiu̅nas et al. ACS Synthetic Biology
- Flagellar region 3b supports strong expression of integrated DNA and the highest chromosomal integration efficiency of theEscherichia coliflagellar regions
- (2015) Mario Juhas et al. Microbial Biotechnology
- High-Efficiency Scarless Genetic Modification in Escherichia coli by Using Lambda Red Recombination and I-SceI Cleavage
- (2014) Junjie Yang et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Total synthesis of a eukaryotic chromosome: Redesigning and SCRaMbLE-ing yeast
- (2014) Dejana Jovicevic et al. BIOESSAYS
- Roles ofBacillus subtilisDprA and SsbA in RecA-mediated Genetic Recombination
- (2014) Tribhuwan Yadav et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- Overexpression of a non-native deoxyxylulose-dependent vitamin B6 pathway in Bacillus subtilis for the production of pyridoxine
- (2014) Fabian M. Commichau et al. METABOLIC ENGINEERING
- Bacillus subtilis and Escherichia coli essential genes and minimal cell factories after one decade of genome engineering
- (2014) M. Juhas et al. MICROBIOLOGY-SGM
- Programming biological operating systems: genome design, assembly and activation
- (2014) Daniel G Gibson NATURE METHODS
- PaperClip: rapid multi-part DNA assembly from existing libraries
- (2014) Maryia Trubitsyna et al. NUCLEIC ACIDS RESEARCH
- Escherichia coli Flagellar Genes as Target Sites for Integration and Expression of Genetic Circuits
- (2014) Mario Juhas et al. PLoS One
- Staphylococcal pathogenicity island DNA packaging system involving cos-site packaging and phage-encoded HNH endonucleases
- (2014) N. Quiles-Puchalt et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Total Synthesis of a Functional Designer Eukaryotic Chromosome
- (2014) N. Annaluru et al. SCIENCE
- RADOM, an Efficient In Vivo Method for Assembling Designed DNA Fragments up to 10 kb Long in Saccharomyces cerevisiae
- (2014) Qiuhui Lin et al. ACS Synthetic Biology
- Rapid and Reliable DNA Assembly via Ligase Cycling Reaction
- (2014) Stefan de Kok et al. ACS Synthetic Biology
- Synthetic biology: Tools to design microbes for the production of chemicals and fuels
- (2013) Sang Woo Seo et al. BIOTECHNOLOGY ADVANCES
- Meeting report: The Cambridge BioDesign TechEvent - Synthetic Biology, a new “Age of Wonder”?
- (2013) Mario Juhas et al. Biotechnology Journal
- Predicting complex phenotype-genotype interactions to enable yeast engineering:Saccharomyces cerevisiaeas a model organism and a cell factory
- (2013) Duygu Dikicioglu et al. Biotechnology Journal
- Bacillus subtilis genome vector-based complete manipulation and reconstruction of genomic DNA for mouse transgenesis
- (2013) Tetsuo Iwata et al. BMC GENOMICS
- One-step assembly and targeted integration of multigene constructs assisted by the I-SceI meganuclease inSaccharomyces cerevisiae
- (2013) Niels G.A. Kuijpers et al. FEMS YEAST RESEARCH
- Improved production of secreted heterologous enzyme in Bacillus subtilis strain MGB874 via modification of glutamate metabolism and growth conditions
- (2013) Kenji Manabe et al. Microbial Cell Factories
- A versatile, efficient strategy for assembly of multi-fragment expression vectors in Saccharomyces cerevisiae using 60 bp synthetic recombination sequences
- (2013) Niels GA Kuijpers et al. Microbial Cell Factories
- Knock-in/Knock-out (KIKO) vectors for rapid integration of large DNA sequences, including whole metabolic pathways, onto the Escherichia coli chromosome at well-characterised loci
- (2013) Suriana Sabri et al. Microbial Cell Factories
- In silico metabolic engineering of Bacillus subtilis for improved production of riboflavin, Egl-237, (R,R)-2,3-butanediol and isobutanol
- (2013) Tong Hao et al. Molecular BioSystems
- Direct transfer of whole genomes from bacteria to yeast
- (2013) Bogumil J Karas et al. NATURE METHODS
- The MASTER (methylation-assisted tailorable ends rational) ligation method for seamless DNA assembly
- (2013) Wei-Hua Chen et al. NUCLEIC ACIDS RESEARCH
- One-pot DNA construction for synthetic biology: the Modular Overlap-Directed Assembly with Linkers (MODAL) strategy
- (2013) Arturo Casini et al. NUCLEIC ACIDS RESEARCH
- Establishment of a Markerless Mutation Delivery System in Bacillus subtilis Stimulated by a Double-Strand Break in the Chromosome
- (2013) Ting Shi et al. PLoS One
- Headful DNA packaging: Bacteriophage SPP1 as a model system
- (2013) Leonor Oliveira et al. VIRUS RESEARCH
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- (2012) Martina Werneburg et al. CHEMBIOCHEM
- Construction of synthetic regulatory networks in yeast
- (2012) Benjamin A. Blount et al. FEBS LETTERS
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- (2012) S. Watanabe et al. JOURNAL OF BACTERIOLOGY
- A PCR-free cloning method for the targeted φ80 Int-mediated integration of any long DNA fragment, bracketed with meganuclease recognition sites, into the Escherichia coli chromosome
- (2012) Anna A. Ublinskaya et al. JOURNAL OF MICROBIOLOGICAL METHODS
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- (2012) Chuck Merryman et al. METABOLIC ENGINEERING
- Genetically switched d-lactate production in Escherichia coli
- (2012) Li Zhou et al. METABOLIC ENGINEERING
- Full-length RecE enhances linear-linear homologous recombination and facilitates direct cloning for bioprospecting
- (2012) Jun Fu et al. NATURE BIOTECHNOLOGY
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- Essential genes as antimicrobial targets and cornerstones of synthetic biology
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- Biosynthesis of polyhydroxyalkanoates containing 2-hydroxybutyrate from unrelated carbon source by metabolically engineered Escherichia coli
- (2011) Si Jae Park et al. APPLIED MICROBIOLOGY AND BIOTECHNOLOGY
- A yeast for all reasons
- (2011) Peter J. Enyeart et al. NATURE
- Synthetic chromosome arms function in yeast and generate phenotypic diversity by design
- (2011) Jessica S. Dymond et al. NATURE
- Metabolic engineering of Escherichia coli for direct production of 1,4-butanediol
- (2011) Harry Yim et al. Nature Chemical Biology
- Yeast 2.0
- (2011) Tal Nawy NATURE METHODS
- Circular polymerase extension cloning for high-throughput cloning of complex and combinatorial DNA libraries
- (2011) Jiayuan Quan et al. Nature Protocols
- A Modular Cloning System for Standardized Assembly of Multigene Constructs
- (2011) Ernst Weber et al. PLoS One
- GoldenBraid: An Iterative Cloning System for Standardized Assembly of Reusable Genetic Modules
- (2011) Alejandro Sarrion-Perdigones et al. PLoS One
- Precise Manipulation of Chromosomes in Vivo Enables Genome-Wide Codon Replacement
- (2011) Farren J. Isaacs et al. SCIENCE
- Essence of life: essential genes of minimal genomes
- (2011) Mario Juhas et al. TRENDS IN CELL BIOLOGY
- Genome-Scale Identification of Resistance Functions in Pseudomonas aeruginosa Using Tn-seq
- (2011) L. A. Gallagher et al. mBio
- High-fidelity gene synthesis by retrieval of sequence-verified DNA identified using high-throughput pyrosequencing
- (2010) Mark Matzas et al. NATURE BIOTECHNOLOGY
- A synthetic DNA transplant
- (2010) Mitsuhiro Itaya NATURE BIOTECHNOLOGY
- Scalable gene synthesis by selective amplification of DNA pools from high-fidelity microchips
- (2010) Sriram Kosuri et al. NATURE BIOTECHNOLOGY
- Pairwise selection assembly for sequence-independent construction of long-length DNA
- (2010) William J. Blake et al. NUCLEIC ACIDS RESEARCH
- Site-specific chromosomal integration of large synthetic constructs
- (2010) Thomas E. Kuhlman et al. NUCLEIC ACIDS RESEARCH
- Creation of a Bacterial Cell Controlled by a Chemically Synthesized Genome
- (2010) D. G. Gibson et al. SCIENCE
- Isoprenoid Pathway Optimization for Taxol Precursor Overproduction in Escherichia coli
- (2010) P. K. Ajikumar et al. SCIENCE
- Simultaneous assay of every Salmonella Typhi gene using one million transposon mutants
- (2009) G. C. Langridge et al. GENOME RESEARCH
- Understanding plasmid effect on hyaluronic acid molecular weight produced by Streptococcus equi subsp. zooepidemicus
- (2009) Esteban Marcellin et al. METABOLIC ENGINEERING
- Enzymatic assembly of DNA molecules up to several hundred kilobases
- (2009) Daniel G Gibson et al. NATURE METHODS
- Golden Gate Shuffling: A One-Pot DNA Shuffling Method Based on Type IIs Restriction Enzymes
- (2009) Carola Engler et al. PLoS One
- Circular Polymerase Extension Cloning of Complex Gene Libraries and Pathways
- (2009) Jiayuan Quan et al. PLoS One
- A One Pot, One Step, Precision Cloning Method with High Throughput Capability
- (2008) Carola Engler et al. PLoS One
- Complete Chemical Synthesis, Assembly, and Cloning of a Mycoplasma genitalium Genome
- (2008) D. G. Gibson et al. SCIENCE
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