Pseudomonas aeruginosa essentials: an update on investigation of essential genes

On the road to synthetic life: the minimal cell and genome-scale engineering

(2015) Mario Juhas   CRITICAL REVIEWS IN BIOTECHNOLOGY

Type IV secretion systems and genomic islands-mediated horizontal gene transfer in Pseudomonas and Haemophilus

(2015) Mario Juhas   MICROBIOLOGICAL RESEARCH

Essential genome ofPseudomonas aeruginosain cystic fibrosis sputum

(2015) Keith H. Turner et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

General and condition-specific essential functions ofPseudomonas aeruginosa

(2015) Samuel A. Lee et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Recent advances toward a molecular mechanism of efflux pump inhibition

(2015) Timothy J. Opperman et al.   Frontiers in Microbiology

Random Mutagenesis of the Multidrug Transporter AcrB from Escherichia coli for Identification of Putative Target Residues of Efflux Pump Inhibitors

(2014) Sabine Schuster et al.   ANTIMICROBIAL AGENTS AND CHEMOTHERAPY

A shotgun antisense approach to the identification of novel essential genes in Pseudomonas aeruginosa

(2014) Ruggero Rusmini et al.   BMC MICROBIOLOGY

Biological Cost of Pyocin Production during the SOS Response in Pseudomonas aeruginosa

(2014) J. Penterman et al.   JOURNAL OF BACTERIOLOGY

Enzymatic Characterization and In Vivo Function of Five Terminal Oxidases in Pseudomonas aeruginosa

(2014) H. Arai et al.   JOURNAL OF BACTERIOLOGY

Bacillus subtilis and Escherichia coli essential genes and minimal cell factories after one decade of genome engineering

(2014) M. Juhas et al.   MICROBIOLOGY-SGM

Iron-Regulated Expression of Alginate Production, Mucoid Phenotype, and Biofilm Formation by Pseudomonas aeruginosa

(2014) J. R. Wiens et al.   mBio

Genome-Wide Saturation Mutagenesis of Burkholderia pseudomallei K96243 Predicts Essential Genes and Novel Targets for Antimicrobial Development

(2014) M. G. Moule et al.   mBio

Rapid Evolution of Culture-Impaired Bacteria during Adaptation to Biofilm Growth

(2014) Jon Penterman et al.   Cell Reports

Folding mechanisms of periplasmic proteins

(2013) Camille Goemans et al.   BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR CELL RESEARCH

Horizontal gene transfer in human pathogens

(2013) Mario Juhas   CRITICAL REVIEWS IN MICROBIOLOGY

Genetic manipulations restored the growth fitness of reduced-genome Escherichia coli

(2013) Yasutaka Hirokawa et al.   JOURNAL OF BIOSCIENCE AND BIOENGINEERING

Structural basis for the inhibition of bacterial multidrug exporters

(2013) Ryosuke Nakashima et al.   NATURE

The molecular mechanisms and physiological consequences of oxidative stress: lessons from a model bacterium

(2013) James A. Imlay   NATURE REVIEWS MICROBIOLOGY

Cyclic di-AMP: another second messenger enters the fray

(2013) Rebecca M. Corrigan et al.   NATURE REVIEWS MICROBIOLOGY

DEG 10, an update of the database of essential genes that includes both protein-coding genes and noncoding genomic elements: Table 1.

(2013) Hao Luo et al.   NUCLEIC ACIDS RESEARCH

Identification of another module involved in the horizontal transfer of the Haemophilus genomic island ICEHin1056

(2013) Mario Juhas et al.   PLASMID

The Efflux Inhibitor Phenylalanine-Arginine Beta-Naphthylamide (PAβN) Permeabilizes the Outer Membrane of Gram-Negative Bacteria

(2013) Ryan P. Lamers et al.   PLoS One

A Comprehensive Analysis of In Vitro and In Vivo Genetic Fitness of Pseudomonas aeruginosa Using High-Throughput Sequencing of Transposon Libraries

(2013) David Skurnik et al.   PLoS Pathogens

Inhibition of Lipopolysaccharide Transport to the Outer Membrane in Pseudomonas aeruginosa by Peptidomimetic Antibiotics

(2012) Martina Werneburg et al.   CHEMBIOCHEM

A genome-wide inducible phenotypic screen identifies antisense RNA constructs silencing Escherichia coli essential genes

(2012) Jia Meng et al.   FEMS MICROBIOLOGY LETTERS

Role of Pseudomonas aeruginosa Peptidoglycan-Associated Outer Membrane Proteins in Vesicle Formation

(2012) Aimee K. Wessel et al.   JOURNAL OF BACTERIOLOGY

Cyclic Di-AMP Homeostasis inBacillus subtilis

(2012) Felix M. P. Mehne et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Building the repertoire of dispensable chromosome regions in Bacillus subtilis entails major refinement of cognate large-scale metabolic model

(2012) Kosei Tanaka et al.   NUCLEIC ACIDS RESEARCH

A Systems Biology Approach to Drug Targets in Pseudomonas aeruginosa Biofilm

(2012) Gunnar Sigurdsson et al.   PLoS One

High Confidence Prediction of Essential Genes in Burkholderia Cenocepacia

(2012) Mario Juhas et al.   PLoS One

Molecular Epidemiology of Chronic Pseudomonas aeruginosa Airway Infections in Cystic Fibrosis

(2012) Nina Cramer et al.   PLoS One

Essential genes as antimicrobial targets and cornerstones of synthetic biology

(2012) Mario Juhas et al.   TRENDS IN BIOTECHNOLOGY

In Vivo-Validated Essential Genes Identified in Acinetobacter baumannii by Using Human Ascites Overlap Poorly with Essential Genes Detected on Laboratory Media

(2012) T. C. Umland et al.   mBio

The essential genome of a bacterium

(2011) B. Christen et al.   Molecular Systems Biology

Essence of life: essential genes of minimal genomes

(2011) Mario Juhas et al.   TRENDS IN CELL BIOLOGY

Genome-Scale Identification of Resistance Functions in Pseudomonas aeruginosa Using Tn-seq

(2011) L. A. Gallagher et al.   mBio

Pseudomonas Genome Database: improved comparative analysis and population genomics capability for Pseudomonas genomes

(2010) G. L. Winsor et al.   NUCLEIC ACIDS RESEARCH

Peptidomimetic Antibiotics Target Outer-Membrane Biogenesis in Pseudomonas aeruginosa

(2010) N. Srinivas et al.   SCIENCE

Antibacterial-Resistant Pseudomonas aeruginosa: Clinical Impact and Complex Regulation of Chromosomally Encoded Resistance Mechanisms

(2009) P. D. Lister et al.   CLINICAL MICROBIOLOGY REVIEWS

Simultaneous assay of every Salmonella Typhi gene using one million transposon mutants

(2009) G. C. Langridge et al.   GENOME RESEARCH

Rapid  -lactam-induced lysis requires successful assembly of the cell division machinery

(2009) H. S. Chung et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Targeting a bacterial stress response to enhance antibiotic action

(2009) S. Lee et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Interplay in the Selection of Fluoroquinolone Resistance and Bacterial Fitness

(2009) Linda L. Marcusson et al.   PLoS Pathogens

Type IV secretion systems: tools of bacterial horizontal gene transfer and virulence

(2008) Mario Juhas et al.   CELLULAR MICROBIOLOGY

Assays for transfer RNA-dependent amino acid biosynthesis

(2008) Kelly Sheppard et al.   METHODS

Large-scale transposon mutagenesis ofMycoplasma pulmonis

(2008) Christopher T. French et al.   MOLECULAR MICROBIOLOGY

A complete collection of single-gene deletion mutants of Acinetobacter baylyi ADP1

(2008) Véronique de Berardinis et al.   Molecular Systems Biology

The art and design of genetic screens: RNA interference

(2008) Michael Boutros et al.   NATURE REVIEWS GENETICS