Fermentation Kinetics of Selected Dietary Fibers by Human Small Intestinal Microbiota Depend on the Type of Fiber and Subject

New View on Dietary Fiber Selection for Predictable Shifts in Gut Microbiota

(2020) T. M. Cantu-Jungles et al.   mBio

NG-Tax 2.0: A Semantic Framework for High-Throughput Amplicon Analysis

(2020) Wasin Poncheewin et al.   Frontiers in Genetics

Ileal and hindgut fermentation in the growing pig fed a human-type diet

(2020) Anna M. E. Hoogeveen et al.   BRITISH JOURNAL OF NUTRITION

Daily Sampling Reveals Personalized Diet-Microbiome Associations in Humans

(2019) Abigail J. Johnson et al.   Cell Host & Microbe

Dietary fiber and health outcomes: an umbrella review of systematic reviews and meta-analyses

(2018) Nicola Veronese et al.   AMERICAN JOURNAL OF CLINICAL NUTRITION

Small Intestine Microbiota Regulate Host Digestive and Absorptive Adaptive Responses to Dietary Lipids

(2018) Kristina Martinez-Guryn et al.   Cell Host & Microbe

Development of an In Vivo and In Vitro Ileal Fermentation Method in a Growing Pig Model

(2018) Carlos A Montoya et al.   JOURNAL OF NUTRITION

In Vitro Fermentation Behavior of Isomalto/Malto-Polysaccharides Using Human Fecal Inoculum Indicates Prebiotic Potential

(2018) Fangjie Gu et al.   MOLECULAR NUTRITION & FOOD RESEARCH

Species Level Description of the Human Ileal Bacterial Microbiota

(2018) Heidi Cecilie Villmones et al.   Scientific Reports

Microbial metabolic gatekeeping in the jejunum

(2018) Michiel Kleerebezem   Nature Microbiology

Personalized Gut Mucosal Colonization Resistance to Empiric Probiotics Is Associated with Unique Host and Microbiome Features

(2018) Niv Zmora et al.   CELL

Complex pectin metabolism by gut bacteria reveals novel catalytic functions

(2017) Didier Ndeh et al.   NATURE

A fibrolytic potential in the human ileum mucosal microbiota revealed by functional metagenomic

(2017) Orlane Patrascu et al.   Scientific Reports

Non-targeted UHPLC-MS metabolomic data processing methods: a comparative investigation of normalisation, missing value imputation, transformation and scaling

(2016) Riccardo Di Guida et al.   Metabolomics

Effects ofin vitrofermentation of barley β-glucan and sugar beet pectin using human fecal inocula on cytokine expression by dendritic cells

(2016) Christiane Rösch et al.   MOLECULAR NUTRITION & FOOD RESEARCH

Effects of pectin on fermentation characteristics, carbohydrate utilization, and microbial community composition in the gastrointestinal tract of weaning pigs

(2016) Lingmin Tian et al.   MOLECULAR NUTRITION & FOOD RESEARCH

The impact of lemon pectin characteristics on TLR activation and T84 intestinal epithelial cell barrier function

(2016) Leonie M. Vogt et al.   Journal of Functional Foods

In vitro fermentation of prebiotic carbohydrates by intestinal microbiota in the presence of Lactobacillus amylovorus DSM 16998

(2016) H.R. Cardarelli et al.   Beneficial Microbes

Revised Estimates for the Number of Human and Bacteria Cells in the Body

(2016) Ron Sender et al.   PLOS BIOLOGY

The small intestine microbiota, nutritional modulation and relevance for health

(2015) Sahar El Aidy et al.   CURRENT OPINION IN BIOTECHNOLOGY

Evaluation of an optimal preparation of human standardized fecal inocula for in vitro fermentation studies

(2015) Marisol Aguirre et al.   JOURNAL OF MICROBIOLOGICAL METHODS

Investigation of pH and Temperature Profiles in the GI Tract of Fasted Human Subjects Using the Intellicap® System

(2015) Mirko Koziolek et al.   JOURNAL OF PHARMACEUTICAL SCIENCES

Fitting Linear Mixed-Effects Models Usinglme4

(2015) Douglas Bates et al.   Journal of Statistical Software

Isomalto/Malto-Polysaccharide, A Novel Soluble Dietary Fiber Made Via Enzymatic Conversion of Starch

(2014) Hans Leemhuis et al.   JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY

The Short-Chain Fatty Acid Uptake Fluxes by Mice on a Guar Gum Supplemented Diet Associate with Amelioration of Major Biomarkers of the Metabolic Syndrome

(2014) Gijs den Besten et al.   PLoS One

Surface area of the digestive tract – revisited

(2014) Herbert F Helander et al.   SCANDINAVIAN JOURNAL OF GASTROENTEROLOGY

Ammonia production by human faecal bacteria, and the enumeration, isolation and characterization of bacteria capable of growth on peptides and amino acids

(2013) Anthony J Richardson et al.   BMC MICROBIOLOGY

Inulin-type fructans: A review on different aspects of biochemical and pharmaceutical technology

(2013) Alexsandra Conceição Apolinário et al.   CARBOHYDRATE POLYMERS

Impact of galacto-oligosaccharides on the gut microbiota composition and metabolic activity upon antibiotic treatment duringin vitrofermentation

(2013) Stephanie E. Ladirat et al.   FEMS MICROBIOLOGY ECOLOGY

A Diet High in Resistant Starch Modulates Microbiota Composition, SCFA Concentrations, and Gene Expression in Pig Intestine

(2013) Daniëlle Haenen et al.   JOURNAL OF NUTRITION

The abundance and variety of carbohydrate-active enzymes in the human gut microbiota

(2013) Abdessamad El Kaoutari et al.   NATURE REVIEWS MICROBIOLOGY

Functional Metagenomics Reveals Novel Pathways of Prebiotic Breakdown by Human Gut Bacteria

(2013) Davide A. Cecchini et al.   PLoS One

Comparative Genomics Analysis of Streptococcus Isolates from the Human Small Intestine Reveals their Adaptation to a Highly Dynamic Ecosystem

(2013) Bartholomeus Van den Bogert et al.   PLoS One

In vitro fermentation of 12 dietary fibres by faecal inoculum from pigs and humans

(2012) Melliana C. Jonathan et al.   FOOD CHEMISTRY

The human small intestinal microbiota is driven by rapid uptake and conversion of simple carbohydrates

(2012) Erwin G Zoetendal et al.   ISME Journal

High-throughput analysis of the impact of antibiotics on the human intestinal microbiota composition

(2012) S.E. Ladirat et al.   JOURNAL OF MICROBIOLOGICAL METHODS

Host-Gut Microbiota Metabolic Interactions

(2012) J. K. Nicholson et al.   SCIENCE

Metabolism of Oligosaccharides and Starch in Lactobacilli: A Review

(2012) Michael G. Gänzle et al.   Frontiers in Microbiology

Short-Chain Fatty Acids Stimulate Glucagon-Like Peptide-1 Secretion via the G-Protein-Coupled Receptor FFAR2

(2011) G. Tolhurst et al.   DIABETES

Kinetic modelling of lactate utilization and butyrate production by key human colonic bacterial species

(2011) Rafael Muñoz-Tamayo et al.   FEMS MICROBIOLOGY ECOLOGY

Regulation of Inflammation by Short Chain Fatty Acids

(2011) Marco A.R. Vinolo et al.   Nutrients

High temporal and inter-individual variation detected in the human ileal microbiota

(2010) Carien C. G. M. Booijink et al.   ENVIRONMENTAL MICROBIOLOGY

Comparative analysis of fecal DNA extraction methods with phylogenetic microarray: Effective recovery of bacterial and archaeal DNA using mechanical cell lysis

(2010) Anne Salonen et al.   JOURNAL OF MICROBIOLOGICAL METHODS

Evaluating the microbial diversity of an in vitro model of the human large intestine by phylogenetic microarray analysis

(2010) M. Rajilic-Stojanovic et al.   MICROBIOLOGY-SGM

Comparison of two next-generation sequencing technologies for resolving highly complex microbiota composition using tandem variable 16S rRNA gene regions

(2010) Marcus J. Claesson et al.   NUCLEIC ACIDS RESEARCH

The link between dietary fibre and human health

(2009) Cyril W.C. Kendall et al.   FOOD HYDROCOLLOIDS

Health benefits of dietary fiber

(2009) James W Anderson et al.   NUTRITION REVIEWS

Fructooligosaccharides exhibit more rapid fermentation than long-chain inulin in an in vitro fermentation system

(2008) Maria L. Stewart et al.   NUTRITION RESEARCH