Instability of natural selection at candidate barrier loci underlying speciation in wood ants

Understanding Admixture: Haplodiploidy to the Rescue

(2019) Pierre Nouhaud et al.   TRENDS IN ECOLOGY & EVOLUTION

Conflict between heterozygote advantage and hybrid incompatibility in haplodiploids (and sex chromosomes)

(2018) Ana-Hermina Ghenu et al.   MOLECULAR ECOLOGY

Natural selection and the predictability of evolution inTimemastick insects

(2018) Patrik Nosil et al.   SCIENCE

Measuring Genetic Differentiation from Pool-seq Data

(2018) Valentin Hivert et al.   GENETICS

Interpreting the genomic landscape of speciation: a road map for finding barriers to gene flow

(2017) M. Ravinet et al.   JOURNAL OF EVOLUTIONARY BIOLOGY

Deciphering the demographic history of allochronic differentiation in the pine processionary moth Thaumetopoea pityocampa

(2017) R. Leblois et al.   MOLECULAR ECOLOGY

Intrinsic incompatibilities evolving as a by-product of divergent ecological selection: Considering them in empirical studies on divergence with gene flow

(2017) J. Kulmuni et al.   MOLECULAR ECOLOGY

Convergent evolution of social hybridogenesis inMessorharvester ants

(2016) Jonathan Romiguier et al.   MOLECULAR ECOLOGY

Recent Positive Selection Has Acted on Genes Encoding Proteins with More Interactions within the Whole Human Interactome

(2015) Pierre Luisi et al.   Genome Biology and Evolution

Fitting Linear Mixed-Effects Models Usinglme4

(2015) Douglas Bates et al.   Journal of Statistical Software

Second-generation PLINK: rising to the challenge of larger and richer datasets

(2015) Christopher C Chang et al.   GigaScience

STRING v10: protein–protein interaction networks, integrated over the tree of life

(2014) Damian Szklarczyk et al.   NUCLEIC ACIDS RESEARCH

Introgression in hybrid ants is favored in females but selected against in males

(2014) J. Kulmuni et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Stick Insect Genomes Reveal Natural Selection's Role in Parallel Speciation

(2014) V. Soria-Carrasco et al.   SCIENCE

Validation of SNP Allele Frequencies Determined by Pooled Next-Generation Sequencing in Natural Populations of a Non-Model Plant Species

(2013) Christian Rellstab et al.   PLoS One

Fast gapped-read alignment with Bowtie 2

(2012) Ben Langmead et al.   NATURE METHODS

PoPoolation2: identifying differentiation between populations using sequencing of pooled DNA samples (Pool-Seq)

(2011) R. Kofler et al.   BIOINFORMATICS

The causes of epistasis

(2011) J. A. G. M. de Visser et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Chromosome numbers in the genus Formica with special reference to the taxonomical position of Formica uralensis Ruzsk. and Formica truncorum Fabr.

(2010) MARITA ROSENGREN et al.   HEREDITAS

Segregation distortion causes large-scale differences between male and female genomes in hybrid ants

(2010) J. Kulmuni et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The Sequence Alignment/Map format and SAMtools

(2009) H. Li et al.   BIOINFORMATICS

De novo assembly of human genomes with massively parallel short read sequencing

(2009) R. Li et al.   GENOME RESEARCH