Digestive gland microbiome of Pleurobema cordatum: mesocosms induce dysbiosis

Microbiome of the Black-Lipped Pearl Oyster Pinctada margaritifera, a Multi-Tissue Description With Functional Profiling

(2019) Caroline Eve Dubé et al.   Frontiers in Microbiology

Structural and compositional mismatch between captive and wild Atlantic salmon (Salmo salar ) parrs’ gut microbiota highlights the relevance of integrating molecular ecology for management and conservation methods

(2018) Camille Lavoie et al.   Evolutionary Applications

Description and characterization of the digestive gland microbiome in the freshwater mussel Villosa nebulosa (Bivalvia: Unionidae)

(2018) Alison K Aceves et al.   JOURNAL OF MOLLUSCAN STUDIES

The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2018 update

(2018) Enis Afgan et al.   NUCLEIC ACIDS RESEARCH

Bacterial diversity and community structure of the intestinal microbiome of Channel Catfish ( Ictalurus punctatus ) during ontogenesis

(2018) Francisca A. Burgos et al.   SYSTEMATIC AND APPLIED MICROBIOLOGY

Seasonal and Sexual Differences in the Microbiota of the Hoopoe Uropygial Secretion

(2018) Sonia Rodríguez-Ruano et al.   Genes

Changes in microbiota along the intestine of grass carp (Ctenopharyngodon idella): Community, interspecific interactions, and functions

(2018) Gang Yang et al.   AQUACULTURE

A Systematic Review of Mycoplasma and Ureaplasma in Urogynaecology

(2017) Nina Combaz-Söhnchen et al.   GEBURTSHILFE UND FRAUENHEILKUNDE

Fish intestinal microbiome: diversity and symbiosis unravelled by metagenomics

(2017) A.M. Tarnecki et al.   JOURNAL OF APPLIED MICROBIOLOGY

Defining the Core Microbiome in Corals’ Microbial Soup

(2017) Alejandra Hernandez-Agreda et al.   TRENDS IN MICROBIOLOGY

Evolutionary Biology Needs Wild Microbiomes

(2017) Sarah M. Hird   Frontiers in Microbiology

Captivity Shapes the Gut Microbiota of Andean Bears: Insights into Health Surveillance

(2017) Andrea Borbón-García et al.   Frontiers in Microbiology

Bacterial dynamics in intestines of the black tiger shrimp and the Pacific white shrimp during Vibrio harveyi exposure

(2016) Wanilada Rungrassamee et al.   JOURNAL OF INVERTEBRATE PATHOLOGY

Captivity humanizes the primate microbiome

(2016) Jonathan B. Clayton et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Probiotic treatment restores protection against lethal fungal infection lost during amphibian captivity

(2016) Jordan G. Kueneman et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

The gut microbiome and degradation enzyme activity of wild freshwater fishes influenced by their trophic levels

(2016) Han Liu et al.   Scientific Reports

Microbial Dysbiosis: Rethinking Disease in Marine Ecosystems

(2016) Suhelen Egan et al.   Frontiers in Microbiology

The Microbiome of Animals: Implications for Conservation Biology

(2016) Simon Bahrndorff et al.   International Journal of Genomics

Disease and Disorders of Freshwater Unionid Mussels: A Brief Overview of Recent Studies

(2016) Francesca Carella et al.   Frontiers in Physiology

Symbiotic Bacteria in Gills and Guts of Chinese Mitten Crab (Eriocheir sinensis) Differ from the Free-Living Bacteria in Water

(2016) Meiling Zhang et al.   PLoS One

The intestinal microbiome and health

(2015) Susan Tuddenham et al.   CURRENT OPINION IN INFECTIOUS DISEASES

The influence of site and season on the gut and pallial fluid microbial communities of the eastern oyster, Crassostrea virginica (Bivalvia, Ostreidae): community-level physiological profiling and genetic structure

(2015) Melissa L. Pierce et al.   HYDROBIOLOGIA

Community Structure of Skin Microbiome of Gulf Killifish, Fundulus grandis, Is Driven by Seasonality and Not Exposure to Oiled Sediments in a Louisiana Salt Marsh

(2015) Andrea M. Larsen et al.   MICROBIAL ECOLOGY

Proteobacteria: microbial signature of dysbiosis in gut microbiota

(2015) Na-Ri Shin et al.   TRENDS IN BIOTECHNOLOGY

Bacterial Community Associated with the Intestinal Tract of Chinese Mitten Crab (Eriocheir sinensis) Farmed in Lake Tai, China

(2015) Xiaobing Chen et al.   PLoS One

Characterization of the intestinal microbiota in Pacific white shrimp, Litopenaeus vannamei, fed diets with different lipid sources

(2014) Meiling Zhang et al.   AQUACULTURE

STAMP: statistical analysis of taxonomic and functional profiles

(2014) Donovan H. Parks et al.   BIOINFORMATICS

Defining dysbiosis and its influence on host immunity and disease

(2014) Charisse Petersen et al.   CELLULAR MICROBIOLOGY

Hemolymph microbiome of Pacific oysters in response to temperature, temperature stress and infection

(2014) Ana Lokmer et al.   ISME Journal

Climate Change Influences on Marine Infectious Diseases: Implications for Management and Society

(2013) Colleen A. Burge et al.   Annual Review of Marine Science

Ocean acidification and host-pathogen interactions: blue mussels,Mytilus edulis, encounteringVibrio tubiashii

(2013) Maria E. Asplund et al.   ENVIRONMENTAL MICROBIOLOGY

Diversity of the skin microbiota of fishes: evidence for host species specificity

(2013) Andrea Larsen et al.   FEMS MICROBIOLOGY ECOLOGY

Microbial community dynamics and effect of environmental microbial reservoirs on red-backed salamanders (Plethodon cinereus)

(2013) Andrew H Loudon et al.   ISME Journal

Marine microbial symbiosis heats up: the phylogenetic and functional response of a sponge holobiont to thermal stress

(2013) Lu Fan et al.   ISME Journal

Predictive functional profiling of microbial communities using 16S rRNA marker gene sequences

(2013) Morgan G I Langille et al.   NATURE BIOTECHNOLOGY

Control of pathogens and pathobionts by the gut microbiota

(2013) Nobuhiko Kamada et al.   NATURE IMMUNOLOGY

Ribosomal Database Project: data and tools for high throughput rRNA analysis

(2013) James R. Cole et al.   NUCLEIC ACIDS RESEARCH

Dysbiosis in Epizootic Shell Disease of the American Lobster (Homarus americanus)

(2012) Norman J. Meres et al.   JOURNAL OF SHELLFISH RESEARCH

Culture-independent methods for studying environmental microorganisms: methods, application, and perspective

(2011) Can Su et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Composition and dynamics of the gill microbiota of an invasive Indo-Pacific oyster in the eastern Mediterranean Sea

(2011) Dror Zurel et al.   ENVIRONMENTAL MICROBIOLOGY

Beyond the Venn diagram: the hunt for a core microbiome

(2011) Ashley Shade et al.   ENVIRONMENTAL MICROBIOLOGY

Predominant Bacteria Isolated from MoribundFusconaia ebenaEbonyshells Experiencing Die-Offs in Pickwick Reservoir, Tennessee River, Alabama

(2011) Clifford E. Starliper et al.   JOURNAL OF SHELLFISH RESEARCH

MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods

(2011) K. Tamura et al.   MOLECULAR BIOLOGY AND EVOLUTION

Mechanisms controlling pathogen colonization of the gut

(2010) Bärbel Stecher et al.   CURRENT OPINION IN MICROBIOLOGY

Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities

(2009) P. D. Schloss et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

The NCBI BioSystems database

(2009) Lewis Y. Geer et al.   NUCLEIC ACIDS RESEARCH

Infectious Diseases of Freshwater Mussels and Other Freshwater Bivalve Mollusks

(2009) JOHN M. GRIZZLE et al.   REVIEWS IN FISHERIES SCIENCE

Tissue-Associated "Candidatus Mycoplasma corallicola" and Filamentous Bacteria on the Cold-Water Coral Lophelia pertusa (Scleractinia)

(2008) S. C. Neulinger et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

A Survey of the Indigenous Microbiota (Bacteria) In Three Species of Mussels from the Clinch and Holston Rivers, Virginia

(2008) Clifford E. Starliper et al.   JOURNAL OF SHELLFISH RESEARCH

Structure, Function, and Evolution of Bacterial ATP-Binding Cassette Systems

(2008) A. L. Davidson et al.   MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS