Gene expression during bacterivorous growth of a widespread marine heterotrophic flagellate
Published 2020 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
Gene expression during bacterivorous growth of a widespread marine heterotrophic flagellate
Authors
Keywords
-
Journal
ISME Journal
Volume -, Issue -, Pages -
Publisher
Springer Science and Business Media LLC
Online
2020-09-12
DOI
10.1038/s41396-020-00770-4
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- A metagenomic assessment of microbial eukaryotic diversity in the global ocean
- (2020) Aleix Obiol et al. Molecular Ecology Resources
- Four high-quality draft genome assemblies of the marine heterotrophic nanoflagellate Cafeteria roenbergensis
- (2020) Thomas Hackl et al. Scientific Data
- Global comparison of bicosoecid Cafeteria-like flagellates from the deep ocean and surface waters, with reorganization of the family Cafeteriaceae
- (2020) Alexandra Schoenle et al. EUROPEAN JOURNAL OF PROTISTOLOGY
- Disentangling the mechanisms shaping the surface ocean microbiota
- (2020) Ramiro Logares et al. Microbiome
- Chitin synthase is involved in vegetative growth, asexual reproduction and pathogenesis of Phytophthora capsici and Phytophthora sojae
- (2019) Wei Cheng et al. ENVIRONMENTAL MICROBIOLOGY
- Marked changes in diversity and relative activity of picoeukaryotes with depth in the world ocean
- (2019) Caterina R. Giner et al. ISME Journal
- Expression of genes involved in phagocytosis in uncultured heterotrophic flagellates
- (2019) Aurelie Labarre et al. LIMNOLOGY AND OCEANOGRAPHY
- How to build a phagosome: new concepts for an old process
- (2018) Florence Niedergang et al. CURRENT OPINION IN CELL BIOLOGY
- Sinking particles promote vertical connectivity in the ocean microbiome
- (2018) Mireia Mestre et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Constant abundances of ubiquitous uncultured protists in the open sea assessed by automated microscopy
- (2018) Jean-François Mangot et al. ENVIRONMENTAL MICROBIOLOGY
- Differential Response of Cafeteria roenbergensis to Different Bacterial and Archaeal Prey Characteristics
- (2018) Daniele De Corte et al. MICROBIAL ECOLOGY
- New approach for understanding genome variations in KEGG
- (2018) Minoru Kanehisa et al. NUCLEIC ACIDS RESEARCH
- UniProt: a worldwide hub of protein knowledge
- (2018) NUCLEIC ACIDS RESEARCH
- The Physiology of Phagocytosis in the Context of Mitochondrial Origin
- (2017) William F. Martin et al. MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS
- BUSCO Applications from Quality Assessments to Gene Prediction and Phylogenomics
- (2017) Robert M Waterhouse et al. MOLECULAR BIOLOGY AND EVOLUTION
- PLAZA 4.0: an integrative resource for functional, evolutionary and comparative plant genomics
- (2017) Michiel Van Bel et al. NUCLEIC ACIDS RESEARCH
- Phagocytosis: A Fundamental Process in Immunity
- (2017) Carlos Rosales et al. Biomed Research International
- Comprehensive transcriptome analysis provides new insights into nutritional strategies and phylogenetic relationships of chrysophytes
- (2017) Daniela Beisser et al. PeerJ
- DADA2: High-resolution sample inference from Illumina amplicon data
- (2016) Benjamin J Callahan et al. NATURE METHODS
- Probing the evolution, ecology and physiology of marine protists using transcriptomics
- (2016) David A. Caron et al. NATURE REVIEWS MICROBIOLOGY
- InterPro in 2017—beyond protein family and domain annotations
- (2016) Robert D. Finn et al. NUCLEIC ACIDS RESEARCH
- Twenty years of theMEROPSdatabase of proteolytic enzymes, their substrates and inhibitors
- (2015) Neil D. Rawlings et al. NUCLEIC ACIDS RESEARCH
- Rethinking the marine carbon cycle: Factoring in the multifarious lifestyles of microbes
- (2015) A. Z. Worden et al. SCIENCE
- Trimmomatic: a flexible trimmer for Illumina sequence data
- (2014) Anthony M. Bolger et al. BIOINFORMATICS
- Global abundance of planktonic heterotrophic protists in the deep ocean
- (2014) Massimo C Pernice et al. ISME Journal
- Fast and sensitive protein alignment using DIAMOND
- (2014) Benjamin Buchfink et al. NATURE METHODS
- Full-length RNA-seq from single cells using Smart-seq2
- (2014) Simone Picelli et al. Nature Protocols
- The phylogenetic and ecological context of cultured and whole genome-sequenced planktonic bacteria from the coastal NW Mediterranean Sea
- (2014) Itziar Lekunberri et al. SYSTEMATIC AND APPLIED MICROBIOLOGY
- The Marine Microbial Eukaryote Transcriptome Sequencing Project (MMETSP): Illuminating the Functional Diversity of Eukaryotic Life in the Oceans through Transcriptome Sequencing
- (2014) Patrick J. Keeling et al. PLOS BIOLOGY
- The Number, Speed, and Impact of Plastid Endosymbioses in Eukaryotic Evolution
- (2013) Patrick J. Keeling Annual Review of Plant Biology
- Culturing Bias in Marine Heterotrophic Flagellates Analyzed Through Seawater Enrichment Incubations
- (2013) Javier del Campo et al. MICROBIAL ECOLOGY
- De novo transcript sequence reconstruction from RNA-seq using the Trinity platform for reference generation and analysis
- (2013) Brian J Haas et al. Nature Protocols
- TRAPID: an efficient online tool for the functional and comparative analysis of de novo RNA-Seq transcriptomes
- (2013) Michiel Van Bel et al. GENOME BIOLOGY
- Fast gapped-read alignment with Bowtie 2
- (2012) Ben Langmead et al. NATURE METHODS
- Differential expression analysis of multifactor RNA-Seq experiments with respect to biological variation
- (2012) Davis J. McCarthy et al. NUCLEIC ACIDS RESEARCH
- Species-specific patterns in the vulnerability of carbon-starved bacteria to protist grazing
- (2011) R Anderson et al. AQUATIC MICROBIAL ECOLOGY
- Low Evolutionary Diversification in a Widespread and Abundant Uncultured Protist (MAST-4)
- (2011) R. Rodriguez-Martinez et al. MOLECULAR BIOLOGY AND EVOLUTION
- Two decades of describing the unseen majority of aquatic microbial diversity
- (2011) LUCIE ZINGER et al. MOLECULAR ECOLOGY
- eggNOG v3.0: orthologous groups covering 1133 organisms at 41 different taxonomic ranges
- (2011) S. Powell et al. NUCLEIC ACIDS RESEARCH
- The Pfam protein families database
- (2011) M. Punta et al. NUCLEIC ACIDS RESEARCH
- Molecular characterization of the evolution of phagosomes
- (2010) Jonathan Boulais et al. Molecular Systems Biology
Find Funding. Review Successful Grants.
Explore over 25,000 new funding opportunities and over 6,000,000 successful grants.
ExploreDiscover Peeref hubs
Discuss science. Find collaborators. Network.
Join a conversation