Methylococcus geothermalis sp. nov., a methanotroph isolated from a geothermal field in the Republic of Korea

Possible cross-feeding pathway of facultative methylotroph Methyloceanibacter caenitepidi Gela4 on methanotroph Methylocaldum marinum S8

(2019) Mio Takeuchi et al.   PLoS One

Methylotetracoccus oryzae Strain C50C1 Is a Novel Type Ib Gammaproteobacterial Methanotroph Adapted to Freshwater Environments

(2019) Mohammad Ghashghavi et al.   mSphere

Proposed minimal standards for the use of genome data for the taxonomy of prokaryotes

(2018) Jongsik Chun et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

MEGA X: Molecular Evolutionary Genetics Analysis across Computing Platforms

(2018) Sudhir Kumar et al.   MOLECULAR BIOLOGY AND EVOLUTION

PlasmidSeeker: identification of known plasmids from bacterial whole genome sequencing reads

(2018) Märt Roosaare et al.   PeerJ

Genomic Insights Into the Acid Adaptation of Novel Methanotrophs Enriched From Acidic Forest Soils

(2018) Ngoc-Loi Nguyen et al.   Frontiers in Microbiology

Characterization of the first rice paddy cluster I isolate, Methyloterricola oryzae gen. nov., sp. nov. and amended description of Methylomagnum ishizawai

(2017) Katharina Frindte et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Introducing EzBioCloud: a taxonomically united database of 16S rRNA gene sequences and whole-genome assemblies

(2017)   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

A novel methanotroph in the genus Methylomonas that contains a distinct clade of soluble methane monooxygenase

(2017) Ngoc-Loi Nguyen et al.   JOURNAL OF MICROBIOLOGY

MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets

(2016) Sudhir Kumar et al.   MOLECULAR BIOLOGY AND EVOLUTION

Starvation and recovery in the deep-sea methanotrophMethyloprofundus sedimenti

(2016) Patricia L. Tavormina et al.   MOLECULAR MICROBIOLOGY

tRNAscan-SE On-line: integrating search and context for analysis of transfer RNA genes

(2016) Todd M. Lowe et al.   NUCLEIC ACIDS RESEARCH

Methylomagnum ishizawai gen. nov., sp. nov., a mesophilic type I methanotroph isolated from rice rhizosphere

(2015) Ashraf Khalifa et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Eukaryotic opportunists dominate the deep-subsurface biosphere in South Africa

(2015) G. Borgonie et al.   Nature Communications

Expanding the Verrucomicrobial Methanotrophic World: Description of Three Novel Species of Methylacidimicrobium gen. nov.

(2014) Muriel C. F. van Teeseling et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Prokka: rapid prokaryotic genome annotation

(2014) T. Seemann   BIOINFORMATICS

Methyloparacoccus murrellii gen. nov., sp. nov., a methanotroph isolated from pond water

(2014) S. Hoefman et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Methylocaldum marinum sp. nov., a thermotolerant, methane-oxidizing bacterium isolated from marine sediments, and emended description of the genus Methylocaldum

(2014) M. Takeuchi et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Genome sequence-based species delimitation with confidence intervals and improved distance functions

(2013) Jan P Meier-Kolthoff et al.   BMC BIOINFORMATICS

Sequencing orphan species initiative (SOS): Filling the gaps in the 16S rRNA gene sequence database for all species with validly published names

(2013) Pablo Yarza et al.   SYSTEMATIC AND APPLIED MICROBIOLOGY

SINA: Accurate high-throughput multiple sequence alignment of ribosomal RNA genes

(2012) Elmar Pruesse et al.   BIOINFORMATICS

Defining bacterial species in the genomic era: insights from the genus Acinetobacter

(2012) Jacqueline Z-M Chan et al.   BMC MICROBIOLOGY

Prokaryotic Abundance and Community Composition in a Freshwater Iron-Rich Microbial Mat at Circumneutral pH

(2012) Shingo Kato et al.   GEOMICROBIOLOGY JOURNAL

Draft Genome Sequence of the Methane-Oxidizing Bacterium Methylococcus capsulatus (Texas)

(2012) Charlotte R. Kleiveland et al.   JOURNAL OF BACTERIOLOGY

SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing

(2012) Anton Bankevich et al.   JOURNAL OF COMPUTATIONAL BIOLOGY

Genomic and Physiological Analysis of Carbon Storage in the Verrucomicrobial Methanotroph “Ca. Methylacidiphilum Fumariolicum” SolV

(2012) Ahmad F. Khadem et al.   Frontiers in Microbiology

Culture-Independent Phylogenetic Analysis of the Microbial Community in Industrial Sugarcane Bagasse Feedstock Piles

(2011) Ukrit RATTANACHOMSRI et al.   BIOSCIENCE BIOTECHNOLOGY AND BIOCHEMISTRY

Distribution and Selection of Poly-3-Hydroxybutyrate Production Capacity in Methanotrophic Proteobacteria

(2011) Allison J. Pieja et al.   MICROBIAL ECOLOGY

Methylogaea oryzae gen. nov., sp. nov., a mesophilic methanotroph isolated from a rice paddy field

(2010) E. Geymonat et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Methylothermus subterraneus sp. nov., a moderately thermophilic methanotroph isolated from a terrestrial subsurface hot aquifer

(2010) H. Hirayama et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Characterization of formulated microbial products by denaturing gradient gel electrophoresis, total cellular fatty acid analysis, and DNA microarray analysis

(2008) E. Nowak et al.   CANADIAN JOURNAL OF MICROBIOLOGY

Laminated Iron Texture by Iron-Oxidizing Bacteria in a Calcite Travertine

(2008) Chizuru Takashima et al.   GEOMICROBIOLOGY JOURNAL