Global transcriptomic profiling demonstrates induction of oxidative stress and of compensatory cellular stress responses in brown trout exposed to glyphosate and Roundup

A comparison across non-model animals suggests an optimal sequencing depth for de novo transcriptome assembly

(2013) Warren R Francis et al.   BMC GENOMICS

Effects of Glyphosate and its Formulation, Roundup, on Reproduction in Zebrafish (Danio rerio)

(2013) Tamsyn M. Uren Webster et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Comparative study of de novo assembly and genome-guided assembly strategies for transcriptome reconstruction based on RNA-Seq

(2013) BingXin Lu et al.   Science China-Life Sciences

Oases: robust de novo RNA-seq assembly across the dynamic range of expression levels

(2012) Marcel H. Schulz et al.   BIOINFORMATICS

Programmed cell death pathways in cancer: a review of apoptosis, autophagy and programmed necrosis

(2012) L. Ouyang et al.   CELL PROLIFERATION

New effects of Roundup on amphibians: Predators reduce herbicide mortality; herbicides induce antipredator morphology

(2012) Rick A. Relyea   ECOLOGICAL APPLICATIONS

Differential genotoxicity of Roundup® formulation and its constituents in blood cells of fish (Anguilla anguilla): considerations on chemical interactions and DNA damaging mechanisms

(2012) S. Guilherme et al.   ECOTOXICOLOGY

Hormones and Endocrine-Disrupting Chemicals: Low-Dose Effects and Nonmonotonic Dose Responses

(2012) Laura N. Vandenberg et al.   ENDOCRINE REVIEWS

Genotoxic effects of the herbicide Roundup® in the fish Corydoras paleatus (Jenyns 1842) after short-term, environmentally low concentration exposure

(2012) Nédia de Castilhos Ghisi et al.   ENVIRONMENTAL MONITORING AND ASSESSMENT

Effects of dietary cholesterol on antioxidant capacity, non-specific immune response, and resistance to Aeromonas hydrophila in rainbow trout (Oncorhynchus mykiss) fed soybean meal-based diets

(2012) Junming Deng et al.   FISH & SHELLFISH IMMUNOLOGY

Effects ofin vivoexposure to Roundup® on immune system ofCaiman latirostris

(2012) María Agustina Latorre et al.   Journal of Immunotoxicology

Fast gapped-read alignment with Bowtie 2

(2012) Ben Langmead et al.   NATURE METHODS

Ethoxylated adjuvants of glyphosate-based herbicides are active principles of human cell toxicity

(2012) R. Mesnage et al.   TOXICOLOGY

Glyphosate impairs male offspring reproductive development by disrupting gonadotropin expression

(2011) Marco Aurelio Romano et al.   ARCHIVES OF TOXICOLOGY

Full-length transcriptome assembly from RNA-Seq data without a reference genome

(2011) Manfred G Grabherr et al.   NATURE BIOTECHNOLOGY

A glyphosate-based herbicide induces necrosis and apoptosis in mature rat testicular cells in vitro, and testosterone decrease at lower levels

(2011) Émilie Clair et al.   TOXICOLOGY IN VITRO

Exposure to sublethal concentration of glyphosate or atrazine-based herbicides alters the phagocytic function and increases the susceptibility of silver catfish fingerlings (Rhamdia quelen) to Aeromonas hydrophila challenge

(2010) Luiz Carlos Kreutz et al.   FISH & SHELLFISH IMMUNOLOGY

Synergistic effects of glyphosate formulation and parasite infection on fish malformations and survival

(2010) David W. Kelly et al.   JOURNAL OF APPLIED ECOLOGY

European eel (Anguilla anguilla) genotoxic and pro-oxidant responses following short-term exposure to Roundup(R)--a glyphosate-based herbicide

(2010) S. Guilherme et al.   MUTAGENESIS

Biases in Illumina transcriptome sequencing caused by random hexamer priming

(2010) Kasper D. Hansen et al.   NUCLEIC ACIDS RESEARCH

Toll-like Receptor and RIG-1-like Receptor Signaling

(2009) Taro Kawai et al.   Annals of the New York Academy of Sciences

The Sequence Alignment/Map format and SAMtools

(2009) H. Li et al.   BIOINFORMATICS

edgeR: a Bioconductor package for differential expression analysis of digital gene expression data

(2009) M. D. Robinson et al.   BIOINFORMATICS

Responses of the European flounderPlatichthys flesusto the chemical stress in estuaries: load of contaminants, gene expression, cellular impact and growth rate

(2009) Estérine Evrard et al.   BIOMARKERS

Identification of a Protein, G0S2, That Lacks Bcl-2 Homology Domains and Interacts with and Antagonizes Bcl-2

(2009) C. Welch et al.   CANCER RESEARCH

Transfer of glyphosate and its degradate AMPA to surface waters through urban sewerage systems

(2009) Fabrizio Botta et al.   CHEMOSPHERE

Roundup® causes oxidative stress in liver and inhibits acetylcholinesterase in muscle and brain of the fish Prochilodus lineatus

(2009) Kathya A. Modesto et al.   CHEMOSPHERE

Effect of pesticides on cell survival in liver and brain rat tissues

(2009) Mariana Astiz et al.   ECOTOXICOLOGY AND ENVIRONMENTAL SAFETY

Oxidative stress responses of rats exposed to Roundup and its active ingredient glyphosate

(2009) Nahla S. El-Shenawy   ENVIRONMENTAL TOXICOLOGY AND PHARMACOLOGY

Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources

(2009) Da Wei Huang et al.   Nature Protocols

Glyphosate-based herbicides are toxic and endocrine disruptors in human cell lines

(2009) Céline Gasnier et al.   TOXICOLOGY

Variability in measures of reproductive success in laboratory-kept colonies of zebrafish and implications for studies addressing population-level effects of environmental chemicals

(2008) G PAULL et al.   AQUATIC TOXICOLOGY

Intracellular redox status and oxidative stress: implications for cell proliferation, apoptosis, and carcinogenesis

(2008) José M. Matés et al.   ARCHIVES OF TOXICOLOGY

Occurrence of Glyphosate in Surface Waters of Southern Ontario

(2008) John Struger et al.   BULLETIN OF ENVIRONMENTAL CONTAMINATION AND TOXICOLOGY

Glyphosate Formulations Induce Apoptosis and Necrosis in Human Umbilical, Embryonic, and Placental Cells

(2008) Nora Benachour et al.   CHEMICAL RESEARCH IN TOXICOLOGY

The occurrence of glyphosate, atrazine, and other pesticides in vernal pools and adjacent streams in Washington, DC, Maryland, Iowa, and Wyoming, 2005–2006

(2008) William A. Battaglin et al.   ENVIRONMENTAL MONITORING AND ASSESSMENT

Low Cost Monitoring of Glyphosate in Surface Waters Using the ELISA Method: An Evaluation

(2008) Jonathan D. Byer et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Velvet: Algorithms for de novo short read assembly using de Bruijn graphs

(2008) D. R. Zerbino et al.   GENOME RESEARCH

Genotoxic effects of Roundup® on the fish Prochilodus lineatus

(2008) D.G.S.M. Cavalcante et al.   MUTATION RESEARCH-GENETIC TOXICOLOGY AND ENVIRONMENTAL MUTAGENESIS