Next generation sequencing analysis reveals that the ribonucleases RNase II, RNase R and PNPase affect bacterial motility and biofilm formation in E. coli
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Title
Next generation sequencing analysis reveals that the ribonucleases RNase II, RNase R and PNPase affect bacterial motility and biofilm formation in E. coli
Authors
Keywords
Exoribonucleases, RNase II, RNase R, PNPase, Transcriptome, RNA-Seq, Motility, Biofilm formation
Journal
BMC GENOMICS
Volume 16, Issue 1, Pages 72
Publisher
Springer Nature
Online
2015-02-13
DOI
10.1186/s12864-015-1237-6
References
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Related references
Note: Only part of the references are listed.- Characterization of the RNase R association with ribosomes
- (2014) Michal Malecki et al. BMC MICROBIOLOGY
- Biofilm Formation and Antibiotic Resistance in Salmonella Typhimurium Are Affected by Different Ribonucleases
- (2014) Margarida Saramago et al. JOURNAL OF MICROBIOLOGY AND BIOTECHNOLOGY
- Bacterial biofilm development as a multicellular adaptation: antibiotic resistance and new therapeutic strategies
- (2013) César de la Fuente-Núñez et al. CURRENT OPINION IN MICROBIOLOGY
- Ribosomes Regulate the Stability and Action of the Exoribonuclease RNase R
- (2013) Wenxing Liang et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- Small RNA Modules Confer Different Stabilities and Interact Differently with Multiple Targets
- (2013) José Marques Andrade et al. PLoS One
- A complex network of small non-coding RNAs regulate motility inEscherichia coli
- (2012) Nicholas De Lay et al. MOLECULAR MICROBIOLOGY
- GeneCodis3: a non-redundant and modular enrichment analysis tool for functional genomics
- (2012) D. Tabas-Madrid et al. NUCLEIC ACIDS RESEARCH
- The crucial role of PNPase in the degradation of small RNAs that are not associated with Hfq
- (2012) J. M. Andrade et al. RNA
- Search for poly(A) polymerase targets in E. coli reveals its implication in surveillance of Glu tRNA processing and degradation of stable RNAs
- (2011) Alexandre Maes et al. MOLECULAR MICROBIOLOGY
- Role of polynucleotide phosphorylase in sRNA function in Escherichia coli
- (2011) N. De Lay et al. RNA
- Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation
- (2010) Cole Trapnell et al. NATURE BIOTECHNOLOGY
- RNase R is a highly unstable protein regulated by growth phase and stress
- (2010) C. Chen et al. RNA
- Escherichia coli RNase R Has Dual Activities, Helicase and RNase
- (2009) N. Awano et al. JOURNAL OF BACTERIOLOGY
- Polynucleotide phosphorylase and the archaeal exosome as poly(A)-polymerases
- (2008) Shimyn Slomovic et al. Biochimica et Biophysica Acta-Gene Regulatory Mechanisms
- Cold Shock Exoribonuclease R (VacB) Is Involved in Aeromonas hydrophila Pathogenesis
- (2008) T. E. Erova et al. JOURNAL OF BACTERIOLOGY
- Genomic Analysis of the Role of RNase R in the Turnover of Pseudomonas putida mRNAs
- (2008) P. Fonseca et al. JOURNAL OF BACTERIOLOGY
- The poly(A)-dependent degradation pathway of rpsO mRNA is primarily mediated by RNase R
- (2008) J. M. Andrade et al. RNA
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