Transcriptome and venom proteome of the box jellyfish Chironex fleckeri

Trimmomatic: a flexible trimmer for Illumina sequence data

(2014) Anthony M. Bolger et al.   BIOINFORMATICS

Chironex fleckeri(Box Jellyfish) Venom Proteins

(2014) Diane L. Brinkman et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Jellyfish venomics and venom gland transcriptomics analysis of Stomolophus meleagris to reveal the toxins associated with sting

(2014) Rongfeng Li et al.   Journal of Proteomics

First Report of a Peroxiredoxin Homologue in Jellyfish: Molecular Cloning, Expression and Functional Characterization of CcPrx4 from Cyanea capillata

(2014) Zengliang Ruan et al.   Marine Drugs

The Dynamically Evolving Nematocyst Content of an Anthozoan, a Scyphozoan, and a Hydrozoan

(2014) Tamar Rachamim et al.   MOLECULAR BIOLOGY AND EVOLUTION

Rapid short term and gradual permanent cardiotoxic effects of vertebrate toxins from Chironex fleckeri (Australian box jellyfish) venom

(2014) Stephanie Chaousis et al.   TOXICON

Optimizing de novo assembly of short-read RNA-seq data for phylogenomics

(2013) Ya Yang et al.   BMC GENOMICS

Proteomic characterisation of toxins isolated from nematocysts of the South Atlantic jellyfish Olindias sambaquiensis

(2013) Andrew J. Weston et al.   TOXICON

Oases: robust de novo RNA-seq assembly across the dynamic range of expression levels

(2012) Marcel H. Schulz et al.   BIOINFORMATICS

CD-HIT: accelerated for clustering the next-generation sequencing data

(2012) Limin Fu et al.   BIOINFORMATICS

A Deep Exploration of the Transcriptome and “Excretory/Secretory” Proteome of AdultFascioloides magna

(2012) Cinzia Cantacessi et al.   MOLECULAR & CELLULAR PROTEOMICS

Cubozoan Venom-Induced Cardiovascular Collapse Is Caused by Hyperkalemia and Prevented by Zinc Gluconate in Mice

(2012) Angel A. Yanagihara et al.   PLoS One

Venom Proteome of the Box Jellyfish Chironex fleckeri

(2012) Diane L. Brinkman et al.   PLoS One

The UniProtKB/Swiss-Prot Tox-Prot program: A central hub of integrated venom protein data

(2012) Florence Jungo et al.   TOXICON

RSEM: accurate transcript quantification from RNA-Seq data with or without a reference genome

(2011) Bo Li et al.   BMC BIOINFORMATICS

Full-length transcriptome assembly from RNA-Seq data without a reference genome

(2011) Manfred G Grabherr et al.   NATURE BIOTECHNOLOGY

SignalP 4.0: discriminating signal peptides from transmembrane regions

(2011) Thomas Nordahl Petersen et al.   NATURE METHODS

KOBAS 2.0: a web server for annotation and identification of enriched pathways and diseases

(2011) Chen Xie et al.   NUCLEIC ACIDS RESEARCH

A pharmacological investigation of the venom extract of the Australian box jellyfish, Chironex fleckeri, in cardiac and vascular tissues

(2011) Richard J.A. Hughes et al.   TOXICOLOGY LETTERS

A novel proteinaceous cytotoxin from the northern Scyphozoa Cyanea capillata (L.) with structural homology to cubozoan haemolysins

(2011) Stephan Lassen et al.   TOXICON

The dynamic genome of Hydra

(2010) Jarrod A. Chapman et al.   NATURE

A guided tour of the Trans-Proteomic Pipeline

(2010) Eric W. Deutsch et al.   PROTEOMICS

The Toxicogenomic Multiverse: Convergent Recruitment of Proteins Into Animal Venoms

(2009) Bryan G. Fry et al.   Annual Review of Genomics and Human Genetics

Astacin-like metalloproteases are a gene family of toxins present in the venom of different species of the brown spider (genus Loxosceles)

(2009) Dilza Trevisan-Silva et al.   BIOCHIMIE

Exploring the Venom Proteome of the Western Diamondback Rattlesnake,Crotalus atrox, via Snake Venomics and Combinatorial Peptide Ligand Library Approaches

(2009) Juan J. Calvete et al.   JOURNAL OF PROTEOME RESEARCH

Protein Identification False Discovery Rates for Very Large Proteomics Data Sets Generated by Tandem Mass Spectrometry

(2009) Lukas Reiter et al.   MOLECULAR & CELLULAR PROTEOMICS

Biochemical and molecular characterisation of cubozoan protein toxins

(2009) Diane L. Brinkman et al.   TOXICON

Phylogeny.fr: robust phylogenetic analysis for the non-specialist

(2008) A. Dereeper et al.   NUCLEIC ACIDS RESEARCH

Partial purification of cytolytic venom proteins from the box jellyfish, Chironex fleckeri

(2007) Diane Brinkman et al.   TOXICON