A genetic map of cassava (Manihot esculenta Crantz) with integrated physical mapping of immunity-related genes
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Title
A genetic map of cassava (Manihot esculenta Crantz) with integrated physical mapping of immunity-related genes
Authors
Keywords
Linkage mapping, Physical mapping, Genotyping by sequencing, Single nucleotide polymorphisms, Immunity-related genes
Journal
BMC GENOMICS
Volume 16, Issue 1, Pages -
Publisher
Springer Nature
Online
2015-03-15
DOI
10.1186/s12864-015-1397-4
References
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Note: Only part of the references are listed.- A genome-wide association study of seed protein and oil content in soybean
- (2014) Eun-Young Hwang et al. BMC GENOMICS
- Genetic Mapping Using Genotyping-by-Sequencing in the Clonally Propagated Cassava
- (2014) Ismail Rabbi et al. CROP SCIENCE
- Association analysis of single nucleotide polymorphisms in candidate genes with root traits in maize (Zea mays L.) seedlings
- (2014) Bharath Kumar et al. PLANT SCIENCE
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- Plant pattern-recognition receptors
- (2014) Cyril Zipfel TRENDS IN IMMUNOLOGY
- High-resolution mapping of resistance to cassava mosaic geminiviruses in cassava using genotyping-by-sequencing and its implications for breeding
- (2014) Ismail Y. Rabbi et al. VIRUS RESEARCH
- Saturated linkage map construction in Rubus idaeus using genotyping by sequencing and genome-independent imputation
- (2013) Judson A Ward et al. BMC GENOMICS
- QTL-seq: rapid mapping of quantitative trait loci in rice by whole genome resequencing of DNA from two bulked populations
- (2013) Hiroki Takagi et al. PLANT JOURNAL
- An Improved Genotyping by Sequencing (GBS) Approach Offering Increased Versatility and Efficiency of SNP Discovery and Genotyping
- (2013) Humira Sonah et al. PLoS One
- Genotyping-by-Sequencing (GBS): A Novel, Efficient and Cost-Effective Genotyping Method for Cattle Using Next-Generation Sequencing
- (2013) Marcos De Donato et al. PLoS One
- Genome-Wide Discovery and Information Resource Development of DNA Polymorphisms in Cassava
- (2013) Tetsuya Sakurai et al. PLoS One
- Bridging the genotyping gap: using genotyping by sequencing (GBS) to add high-density SNP markers and new value to traditional bi-parental mapping and breeding populations
- (2013) Jennifer Spindel et al. THEORETICAL AND APPLIED GENETICS
- Copy number polymorphism in plant genomes
- (2013) Agnieszka Żmieńko et al. THEORETICAL AND APPLIED GENETICS
- Identification and localisation of the NB-LRR gene family within the potato genome
- (2012) Florian Jupe et al. BMC GENOMICS
- Molecular Marker Analysis and Validation of Resistance to Cassava Mosaic Disease in Elite Cassava Genotypes in Nigeria
- (2012) E. Okogbenin et al. CROP SCIENCE
- Development of High-Density Genetic Maps for Barley and Wheat Using a Novel Two-Enzyme Genotyping-by-Sequencing Approach
- (2012) Jesse A. Poland et al. PLoS One
- An EST-derived SNP and SSR genetic linkage map of cassava (Manihot esculenta Crantz)
- (2012) Ismail Yusuf Rabbi et al. THEORETICAL AND APPLIED GENETICS
- The Cassava Genome: Current Progress, Future Directions
- (2012) Simon Prochnik et al. Tropical Plant Biology
- Is Cassava the Answer to African Climate Change Adaptation?
- (2012) Andy Jarvis et al. Tropical Plant Biology
- The VIRCA Project
- (2012) Nigel J. Taylor et al. GM Crops & Food-Biotechnology in Agriculture and the Food Chain
- The variant call format and VCFtools
- (2011) P. Danecek et al. BIOINFORMATICS
- A genome scan for quantitative trait loci affecting cyanogenic potential of cassava root in an outbred population
- (2011) Sukhuman Whankaew et al. BMC GENOMICS
- Meta-analysis of grain yield QTL identified during agricultural drought in grasses showed consensus
- (2011) BP Mallikarjuna Swamy et al. BMC GENOMICS
- Identification of a functional transposon insertion in the maize domestication gene tb1
- (2011) Anthony Studer et al. NATURE GENETICS
- Genotype and SNP calling from next-generation sequencing data
- (2011) Rasmus Nielsen et al. NATURE REVIEWS GENETICS
- Genome-wide genetic marker discovery and genotyping using next-generation sequencing
- (2011) John W. Davey et al. NATURE REVIEWS GENETICS
- QuartetS: a fast and accurate algorithm for large-scale orthology detection
- (2011) Chenggang Yu et al. NUCLEIC ACIDS RESEARCH
- HMMER web server: interactive sequence similarity searching
- (2011) R. D. Finn et al. NUCLEIC ACIDS RESEARCH
- A Robust, Simple Genotyping-by-Sequencing (GBS) Approach for High Diversity Species
- (2011) Robert J. Elshire et al. PLoS One
- Comparative SNP and Haplotype Analysis Reveals a Higher Genetic Diversity and Rapider LD Decay in Tropical than Temperate Germplasm in Maize
- (2011) Yanli Lu et al. PLoS One
- A genome-wide genetic map of NB-LRR disease resistance loci in potato
- (2011) Erin Bakker et al. THEORETICAL AND APPLIED GENETICS
- SSR and EST-SSR-based genetic linkage map of cassava (Manihot esculenta Crantz)
- (2011) Supajit Sraphet et al. THEORETICAL AND APPLIED GENETICS
- Identification, validation and high-throughput genotyping of transcribed gene SNPs in cassava
- (2011) Morag E. Ferguson et al. THEORETICAL AND APPLIED GENETICS
- Comparing signaling mechanisms engaged in pattern-triggered and effector-triggered immunity
- (2010) Kenichi Tsuda et al. CURRENT OPINION IN PLANT BIOLOGY
- Pervasive gene content variation and copy number variation in maize and its undomesticated progenitor
- (2010) R. A. Swanson-Wagner et al. GENOME RESEARCH
- Construction of a genetic linkage map using simple sequence repeat markers from expressed sequence tags for cassava (Manihot esculenta Crantz)
- (2010) S. Kunkeaw et al. MOLECULAR BREEDING
- The genome of woodland strawberry (Fragaria vesca)
- (2010) Vladimir Shulaev et al. NATURE GENETICS
- Cassava, a potential biofuel crop in (the) People’s Republic of China
- (2009) Christer Jansson et al. APPLIED ENERGY
- Fast and accurate short read alignment with Burrows-Wheeler transform
- (2009) H. Li et al. BIOINFORMATICS
- Gene-based microsatellites for cassava (Manihot esculenta Crantz): prevalence, polymorphisms, and cross-taxa utility
- (2009) Adebola AJ Raji et al. BMC PLANT BIOLOGY
- Circos: An information aesthetic for comparative genomics
- (2009) M. Krzywinski et al. GENOME RESEARCH
- Genome-wide identification of NBS-encoding resistance genes in Brassica rapa
- (2009) Jeong-Hwan Mun et al. MOLECULAR GENETICS AND GENOMICS
- The TIR Domain of TIR-NB-LRR Resistance Proteins Is a Signaling Domain Involved in Cell Death Induction
- (2009) Michal R. Swiderski et al. MOLECULAR PLANT-MICROBE INTERACTIONS
- The Pfam protein families database
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- Genetic linkage map of cassava (Manihot esculentaCrantz) based on AFLP and SSR markers
- (2009) S. Kunkeaw et al. PLANT BREEDING
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- Structure–function analysis of the NB-ARC domain of plant disease resistance proteins
- (2008) Gerben van Ooijen et al. JOURNAL OF EXPERIMENTAL BOTANY
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