Integrative phenotyping framework (iPF): integrative clustering of multiple omics data identifies novel lung disease subphenotypes

Modeling association between DNA copy number and gene expression with constrained piecewise linear regression splines

(2013) Gwenaël G. R. Leday et al.   Annals of Applied Statistics

Joint and individual variation explained (JIVE) for integrated analysis of multiple data types

(2013) Eric F. Lock et al.   Annals of Applied Statistics

Bayesian consensus clustering

(2013) Eric F. Lock et al.   BIOINFORMATICS

Clinical Features and Outcomes in Combined Pulmonary Fibrosis and Emphysema in Idiopathic Pulmonary Fibrosis

(2013) Christopher J. Ryerson et al.   CHEST

Global Strategy for the Diagnosis, Management, and Prevention of Chronic Obstructive Pulmonary Disease

(2012) Jørgen Vestbo et al.   AMERICAN JOURNAL OF RESPIRATORY AND CRITICAL CARE MEDICINE

Identifying multi-layer gene regulatory modules from multi-dimensional genomic data

(2012) W. Li et al.   BIOINFORMATICS

A functional methylome map of ulcerative colitis

(2012) R. Hasler et al.   GENOME RESEARCH

Integrating data

(2012) Nils Gehlenborg et al.   NATURE METHODS

Prednisone, Azathioprine, andN-Acetylcysteine for Pulmonary Fibrosis

(2012)   NEW ENGLAND JOURNAL OF MEDICINE

Comprehensive literature review and statistical considerations for microarray meta-analysis

(2012) George C. Tseng et al.   NUCLEIC ACIDS RESEARCH

Discovery of multi-dimensional modules by integrative analysis of cancer genomic data

(2012) Shihua Zhang et al.   NUCLEIC ACIDS RESEARCH

Computational Medicine: Translating Models to Clinical Care

(2012) R. L. Winslow et al.   Science Translational Medicine

An Official ATS/ERS/JRS/ALAT Statement: Idiopathic Pulmonary Fibrosis: Evidence-based Guidelines for Diagnosis and Management

(2011) Ganesh Raghu et al.   AMERICAN JOURNAL OF RESPIRATORY AND CRITICAL CARE MEDICINE

CNAmet: an R package for integrating copy number, methylation and expression data

(2011) Riku Louhimo et al.   BIOINFORMATICS

Integrative genomics identifies MCU as an essential component of the mitochondrial calcium uniporter

(2011) Joshua M. Baughman et al.   NATURE

Integrative genomics viewer

(2011) James T Robinson et al.   NATURE BIOTECHNOLOGY

A Double-Layered Mixture Model for the Joint Analysis of DNA Copy Number and Gene Expression Data

(2010) Hyungwon Choi et al.   JOURNAL OF COMPUTATIONAL BIOLOGY

Messy biology and the origins of evolutionary innovations

(2010) Dan S Tawfik   Nature Chemical Biology

Integrative clustering of multiple genomic data types using a joint latent variable model with application to breast and lung cancer subtype analysis

(2009) Ronglai Shen et al.   BIOINFORMATICS

Incidence, Prevalence, and Clinical Course of Idiopathic Pulmonary Fibrosis

(2009) Evans R. Fernández Pérez et al.   CHEST

Integrated omics approaches in plant systems biology

(2009) Atsushi Fukushima et al.   CURRENT OPINION IN CHEMICAL BIOLOGY

Integrating multiple 'omics' analysis for microbial biology: application and methodologies

(2009) W. Zhang et al.   MICROBIOLOGY-SGM