Comparative genomics of 43 strains of Xanthomonas citri pv. citri reveals the evolutionary events giving rise to pathotypes with different host ranges
Published 2015 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
Comparative genomics of 43 strains of Xanthomonas citri pv. citri reveals the evolutionary events giving rise to pathotypes with different host ranges
Authors
Keywords
Xanthomonas citri, Plant pathogen, Genome evolution, Pathotype evolution, Host range determination, Recombination, Gene islands, Ancestral character estimation, Pathogenicity, Gene presence/absence
Journal
BMC GENOMICS
Volume 16, Issue 1, Pages -
Publisher
Springer Nature
Online
2015-12-23
DOI
10.1186/s12864-015-2310-x
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- Bridgehead invasion of a monomorphic plant pathogenic bacterium:Xanthomonas citripv. citri, an emerging citrus pathogen in Mali and Burkina Faso
- (2015) A. Leduc et al. ENVIRONMENTAL MICROBIOLOGY
- Positive selection is the main driving force for evolution of citrus canker-causing Xanthomonas
- (2015) Yunzeng Zhang et al. ISME Journal
- A functional XopAG homologue inXanthomonas fuscanspv.aurantifoliistrain C limits host range
- (2015) A. M. Gochez et al. PLANT PATHOLOGY
- A MLVA Genotyping Scheme for Global Surveillance of the Citrus Pathogen Xanthomonas citri pv. citri Suggests a Worldwide Geographical Expansion of a Single Genetic Lineage
- (2014) Olivier Pruvost et al. PLoS One
- Comparative genomic and transcriptome analyses of pathotypes of Xanthomonas citri subsp. citri provide insights into mechanisms of bacterial virulence and host range
- (2013) Neha Jalan et al. BMC GENOMICS
- Genome sequence of Xanthomonas fuscans subsp. fuscans strain 4834-R reveals that flagellar motility is not a general feature of xanthomonads
- (2013) Armelle Darrasse et al. BMC GENOMICS
- Identification and characterization of biofilm formation-defective mutants of Xanthomonas citri subsp. citri
- (2013) F. Malamud et al. MICROBIOLOGY-SGM
- Variations in type III effector repertoires, pathological phenotypes and host range ofXanthomonas citripv.citripathotypes
- (2013) Aline Escalon et al. MOLECULAR PLANT PATHOLOGY
- Atypical Regulation of Virulence-Associated Functions by a Diffusible Signal Factor in Xanthomonas oryzae pv. oryzae
- (2012) Rikky Rai et al. MOLECULAR PLANT-MICROBE INTERACTIONS
- jModelTest 2: more models, new heuristics and parallel computing
- (2012) Diego Darriba et al. NATURE METHODS
- Fast gapped-read alignment with Bowtie 2
- (2012) Ben Langmead et al. NATURE METHODS
- MicroScope—an integrated microbial resource for the curation and comparative analysis of genomic and metabolic data
- (2012) David Vallenet et al. NUCLEIC ACIDS RESEARCH
- The variant call format and VCFtools
- (2011) P. Danecek et al. BIOINFORMATICS
- A Pilot Study of Bacterial Genes with Disrupted ORFs Reveals a Surprising Profusion of Protein Sequence Recoding Mediated by Ribosomal Frameshifting and Transcriptional Realignment
- (2011) V. Sharma et al. MOLECULAR BIOLOGY AND EVOLUTION
- High-Throughput Screening and Analysis of Genes ofXanthomonas citrisubsp.citriInvolved in Citrus Canker Symptom Development
- (2011) Qing Yan et al. MOLECULAR PLANT-MICROBE INTERACTIONS
- Structure-Function Analysis of the HrpB2-HrcU Interaction in the Xanthomonas citri Type III Secretion System
- (2011) Paola A. Cappelletti et al. PLoS One
- Genome-Wide Mutagenesis of Xanthomonas axonopodis pv. citri Reveals Novel Genetic Determinants and Regulation Mechanisms of Biofilm Formation
- (2011) Jinyun Li et al. PLoS One
- Virulence determinants, drug resistance and mobile genetic elements of Laribacter hongkongensis: a genome-wide analysis
- (2011) Susanna KP Lau et al. Cell and Bioscience
- Computational and Biochemical Analysis of the Xanthomonas Effector AvrBs2 and Its Role in the Modulation of Xanthomonas Type Three Effector Delivery
- (2011) Bingyu Zhao et al. PLoS Pathogens
- Mugsy: fast multiple alignment of closely related whole genomes
- (2010) Samuel V. Angiuoli et al. BIOINFORMATICS
- Secretion of early and late substrates of the type III secretion system from Xanthomonas is controlled by HpaC and the C-terminal domain of HrcU
- (2010) Christian Lorenz et al. MOLECULAR MICROBIOLOGY
- The Monofunctional Catalase KatE of Xanthomonas axonopodis pv. citri Is Required for Full Virulence in Citrus Plants
- (2010) María Laura Tondo et al. PLoS One
- New Algorithms and Methods to Estimate Maximum-Likelihood Phylogenies: Assessing the Performance of PhyML 3.0
- (2010) Stéphane Guindon et al. SYSTEMATIC BIOLOGY
- The Sequence Alignment/Map format and SAMtools
- (2009) H. Li et al. BIOINFORMATICS
- Circos: An information aesthetic for comparative genomics
- (2009) M. Krzywinski et al. GENOME RESEARCH
- Amplified fragment length polymorphism and multilocus sequence analysis-based genotypic relatedness among pathogenic variants of Xanthomonas citri pv. citri and Xanthomonas campestris pv. bilvae
- (2009) L. Bui Thi Ngoc et al. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
- The xrvA gene of Xanthomonas oryzae pv. oryzae, encoding an H-NS-like protein, regulates virulence in rice
- (2009) J.-X. Feng et al. MICROBIOLOGY-SGM
- Identification ofXanthomonas citrissp.citrihost specificity genes in a heterologous expression host
- (2009) MYRIAN RYBAK et al. MOLECULAR PLANT PATHOLOGY
- The type III effectors ofXanthomonas
- (2009) FRANK F. WHITE et al. MOLECULAR PLANT PATHOLOGY
- Type III Protein Secretion in Plant Pathogenic Bacteria
- (2009) D. Buttner et al. PLANT PHYSIOLOGY
- The Origins of Plant Pathogens in Agro-Ecosystems
- (2008) Eva H. Stukenbrock et al. Annual Review of Phytopathology
- Characterization of the RND-Type Multidrug Efflux Pump MexAB-OprM of the Plant Pathogen Pseudomonas syringae
- (2008) S. O. Stoitsova et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- From Local Surveys to Global Surveillance: Three High-Throughput Genotyping Methods for Epidemiological Monitoring of Xanthomonas citri pv. citri Pathotypes
- (2008) L. Bui Thi Ngoc et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Velvet: Algorithms for de novo short read assembly using de Bruijn graphs
- (2008) D. R. Zerbino et al. GENOME RESEARCH
- Multiple Adhesin-Like Functions ofXanthomonas oryzaepv.oryzaeAre Involved in Promoting Leaf Attachment, Entry, and Virulence on Rice
- (2008) Amit Das et al. MOLECULAR PLANT-MICROBE INTERACTIONS
Add your recorded webinar
Do you already have a recorded webinar? Grow your audience and get more views by easily listing your recording on Peeref.
Upload NowCreate your own webinar
Interested in hosting your own webinar? Check the schedule and propose your idea to the Peeref Content Team.
Create Now