Using host-pathogen protein interactions to identify and characterize Francisella tularensis virulence factors

Mining Host-Pathogen Protein Interactions to Characterize Burkholderia mallei Infectivity Mechanisms

(2015) Vesna Memišević et al.   PLoS Computational Biology

Characterization of Tetratricopeptide Repeat-Like Proteins in Francisella tularensis and Identification of a Novel Locus Required for Virulence

(2014) Vera Dankova et al.   INFECTION AND IMMUNITY

The VgrG Proteins Are “à la Carte” Delivery Systems for Bacterial Type VI Effectors

(2014) Abderrahman Hachani et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

A Second-generation Protein–Protein Interaction Network ofHelicobacter pylori

(2014) Roman Häuser et al.   MOLECULAR & CELLULAR PROTEOMICS

The binary protein-protein interaction landscape of Escherichia coli

(2014) Seesandra V Rajagopala et al.   NATURE BIOTECHNOLOGY

RCytoscape: tools for exploratory network analysis

(2013) Paul T Shannon et al.   BMC BIOINFORMATICS

TXNIP Maintains the Hematopoietic Cell Pool by Switching the Function of p53 under Oxidative Stress

(2013) Haiyoung Jung et al.   Cell Metabolism

NovelBurkholderia malleiVirulence Factors Linked to Specific Host-Pathogen Protein Interactions

(2013) Vesna Memišević et al.   MOLECULAR & CELLULAR PROTEOMICS

The Mouse Genome Database: integration of and access to knowledge about the laboratory mouse

(2013) Judith A. Blake et al.   NUCLEIC ACIDS RESEARCH

DOOR 2.0: presenting operons and their functions through dynamic and integrated views

(2013) Xizeng Mao et al.   NUCLEIC ACIDS RESEARCH

DEG 10, an update of the database of essential genes that includes both protein-coding genes and noncoding genomic elements: Table 1.

(2013) Hao Luo et al.   NUCLEIC ACIDS RESEARCH

Adherence and uptake ofFrancisellainto host cells

(2013) G Brett Moreau et al.   Virulence

QuartetS-DB: a large-scale orthology database for prokaryotes and eukaryotes inferred by evolutionary evidence

(2012) Chenggang Yu et al.   BMC BIOINFORMATICS

Inferring high-confidence human protein-protein interactions

(2012) Xueping Yu et al.   BMC BIOINFORMATICS

Members of the Francisella tularensis Phagosomal Transporter Subfamily of Major Facilitator Superfamily Transporters Are Critical for Pathogenesis

(2012) Mark E. Marohn et al.   INFECTION AND IMMUNITY

Genenames.org: the HGNC resources in 2013

(2012) Kristian A. Gray et al.   NUCLEIC ACIDS RESEARCH

Unique Substrates Secreted by the Type VI Secretion System of Francisella tularensis during Intramacrophage Infection

(2012) Jeanette E. Bröms et al.   PLoS One

A homogeneous and nonisotopic assay for phosphatidylinositol 4-kinases

(2011) Andrew W. Tai et al.   ANALYTICAL BIOCHEMISTRY

Insight into Bacterial Virulence Mechanisms against Host Immune Response via the Yersinia pestis-Human Protein-Protein Interaction Network

(2011) Huiying Yang et al.   INFECTION AND IMMUNITY

Identification of a Putative Chaperone Involved in Stress Resistance and Virulence inFrancisella tularensis

(2011) Jennifer Dieppedale et al.   INFECTION AND IMMUNITY

PATRIC: the Comprehensive Bacterial Bioinformatics Resource with a Focus on Human Pathogenic Species

(2011) Joseph J. Gillespie et al.   INFECTION AND IMMUNITY

Impact of Francisella tularensis pilin homologs on pilus formation and virulence

(2011) Nicole M. Ark et al.   MICROBIAL PATHOGENESIS

Categorizing Biases in High-Confidence High-Throughput Protein-Protein Interaction Data Sets

(2011) Xueping Yu et al.   MOLECULAR & CELLULAR PROTEOMICS

SignalP 4.0: discriminating signal peptides from transmembrane regions

(2011) Thomas Nordahl Petersen et al.   NATURE METHODS

ProOpDB: Prokaryotic Operon DataBase

(2011) B. Taboada et al.   NUCLEIC ACIDS RESEARCH

NCBI Reference Sequences (RefSeq): current status, new features and genome annotation policy

(2011) K. D. Pruitt et al.   NUCLEIC ACIDS RESEARCH

Database resources of the National Center for Biotechnology Information

(2011) E. W. Sayers et al.   NUCLEIC ACIDS RESEARCH

Biochemistry and cell signaling taught by bacterial effectors

(2011) Jixin Cui et al.   TRENDS IN BIOCHEMICAL SCIENCES

The Francisella Intracellular Life Cycle: Toward Molecular Mechanisms of Intracellular Survival and Proliferation

(2011) Audrey Chong et al.   Frontiers in Microbiology

Exploitation of Host Cell Biology and Evasion of Immunity by Francisella Tularensis

(2011) Rexford Asare et al.   Frontiers in Microbiology

Manipulation of Host Cell Death Pathways during Microbial Infections

(2010) Mohamed Lamkanfi et al.   Cell Host & Microbe

Francisella tularensisSchu S4 O-Antigen and Capsule Biosynthesis Gene Mutants Induce Early Cell Death in Human Macrophages

(2010) Stephen R. Lindemann et al.   INFECTION AND IMMUNITY

The Human-Bacterial Pathogen Protein Interaction Networks of Bacillus anthracis, Francisella tularensis, and Yersinia pestis

(2010) Matthew D. Dyer et al.   PLoS One

Mig-6 controls EGFR trafficking and suppresses gliomagenesis

(2010) H. Ying et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Improving the yeast two-hybrid system with permutated fusions proteins: the Varicella Zoster Virus interactome

(2010) Thorsten Stellberger et al.   Proteome Science

Comparative proteomic profiling of culture filtrate proteins of less and highly virulent Francisella tularensis strains

(2010) Klara Konecna et al.   PROTEOMICS

The Role of the Francisella Tularensis Pathogenicity Island in Type VI Secretion, Intracellular Survival, and Modulation of Host Cell Signaling

(2010) Jeanette E. Bröms et al.   Frontiers in Microbiology

Intracellular biology and virulence determinants ofFrancisella tularensisrevealed by transcriptional profiling inside macrophages

(2009) Tara D. Wehrly et al.   CELLULAR MICROBIOLOGY

The unraveling panoply of Francisella tularensis virulence attributes

(2009) Karin L Meibom et al.   CURRENT OPINION IN MICROBIOLOGY

Acid Phosphatases Do Not Contribute to the Pathogenesis of Type A Francisella tularensis

(2009) R. Child et al.   INFECTION AND IMMUNITY

Functional analyses of pilin-like proteins from Francisella tularensis: complementation of type IV pilus phenotypes in Neisseria gonorrhoeae

(2009) E. Salomonsson et al.   MICROBIOLOGY-SGM

The Francisella tularensis pathogenicity island encodes a secretion system that is required for phagosome escape and virulence

(2009) Jeffrey R. Barker et al.   MOLECULAR MICROBIOLOGY

Akt and SHIP Modulate Francisella Escape from the Phagosome and Induction of the Fas-Mediated Death Pathway

(2009) Murugesan V. S. Rajaram et al.   PLoS One

A Francisella tularensis Schu S4 Purine Auxotroph Is Highly Attenuated in Mice but Offers Limited Protection against Homologous Intranasal Challenge

(2008) Roger D. Pechous et al.   PLoS One

High-Quality Binary Protein Interaction Map of the Yeast Interactome Network

(2008) H. Yu et al.   SCIENCE