A novel member of the let-7 microRNA family is associated with developmental transitions in filarial nematode parasites

Refining microRNA target predictions: Sorting the wheat from the chaff

(2014) William Ritchie et al.   BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS

HTSeq--a Python framework to work with high-throughput sequencing data

(2014) S. Anders et al.   BIOINFORMATICS

Autoregulation oflin-4microRNA transcription by RNA activation (RNAa) inC. elegans

(2014) Michael Turner et al.   CELL CYCLE

Diversity and Expression of MicroRNAs in the Filarial Parasite, Brugia malayi

(2014) Catherine B. Poole et al.   PLoS One

Exosomes secreted by nematode parasites transfer small RNAs to mammalian cells and modulate innate immunity

(2014) Amy H. Buck et al.   Nature Communications

Functional diversification of Argonautes in nematodes: an expanding universe: Figure 1

(2013) Amy H. Buck et al.   BIOCHEMICAL SOCIETY TRANSACTIONS

Molecular mechanisms of ETS transcription factor-mediated tumorigenesis

(2013) Adwitiya Kar et al.   CRITICAL REVIEWS IN BIOCHEMISTRY AND MOLECULAR BIOLOGY

The Draft Genome and Transcriptome of Panagrellus redivivus Are Shaped by the Harsh Demands of a Free-Living Lifestyle

(2013) J. Srinivasan et al.   GENETICS

Conserved miRNAs Are Candidate Post-Transcriptional Regulators of Developmental Arrest in Free-Living and Parasitic Nematodes

(2013) Rina Ahmed et al.   Genome Biology and Evolution

High-throughput sequencing reveals extraordinary fluidity of miRNA, piRNA, and siRNA pathways in nematodes

(2013) Z. Shi et al.   GENOME RESEARCH

Interdomain lateral gene transfer of an essential ferrochelatase gene in human parasitic nematodes

(2013) B. Wu et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

TopHat2: accurate alignment of transcriptomes in the presence of insertions, deletions and gene fusions

(2013) Daehwan Kim et al.   GENOME BIOLOGY

In vitro gene silencing of independent phosphoglycerate mutase (iPGM) in the filarial parasite Brugia malayi

(2013) Prashant Kumar Singh et al.   Infectious Diseases of Poverty

Diversity in parasitic nematode genomes: the microRNAs of Brugia pahangi and Haemonchus contortus are largely novel

(2012) Alan D Winter et al.   BMC GENOMICS

Evolutionary relationships between miRNA genes and their activity

(2012) Yan Zhu et al.   BMC GENOMICS

ESE3/EHF Controls Epithelial Cell Differentiation and Its Loss Leads to Prostate Tumors with Mesenchymal and Stem-like Features

(2012) D. Albino et al.   CANCER RESEARCH

The C. elegans MicroRNA mir-71 Acts in Neurons to Promote Germline-Mediated Longevity through Regulation of DAF-16/FOXO

(2012) Konstantinos Boulias et al.   Cell Metabolism

The genome of the heartworm, Dirofilaria immitis, reveals drug and vaccine targets

(2012) Christelle Godel et al.   FASEB JOURNAL

Prolyl 4-Hydroxlase Activity Is Essential for Development and Cuticle Formation in the Human Infective Parasitic NematodeBrugia malayi

(2012) Alan D. Winter et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Differential expression analysis of multifactor RNA-Seq experiments with respect to biological variation

(2012) Davis J. McCarthy et al.   NUCLEIC ACIDS RESEARCH

Efficient in vitro RNA interference and immunofluorescence-based phenotype analysis in a human parasitic nematode, Brugia malayi

(2012) Frédéric Landmann et al.   Parasites & Vectors

In Vitro Silencing of Brugia malayi Trehalose-6-Phosphate Phosphatase Impairs Embryogenesis and In Vivo Development of Infective Larvae in Jirds

(2012) Susheela Kushwaha et al.   PLoS Neglected Tropical Diseases

Deep small RNA sequencing from the nematode Ascaris reveals conservation, functional diversification, and novel developmental profiles

(2011) J. Wang et al.   GENOME RESEARCH

Effect of life history on microRNA expression during C. elegans development

(2011) X. Karp et al.   RNA

MicroRNAs Both Promote and Antagonize Longevity in C. elegans

(2010) Alexandre de Lencastre et al.   CURRENT BIOLOGY

Loss of Individual MicroRNAs Causes Mutant Phenotypes in Sensitized Genetic Backgrounds in C. elegans

(2010) John L. Brenner et al.   CURRENT BIOLOGY

Many Families of C. elegans MicroRNAs Are Not Essential for Development or Viability

(2010) Ezequiel Alvarez-Saavedra et al.   CURRENT BIOLOGY

The Conserved miR-51 microRNA Family Is Redundantly Required for Embryonic Development and Pharynx Attachment in Caenorhabditis elegans

(2010) W. R. Shaw et al.   GENETICS

Formation, regulation and evolution of Caenorhabditis elegans 3′UTRs

(2010) Calvin H. Jan et al.   NATURE

Comprehensive discovery of endogenous Argonaute binding sites in Caenorhabditis elegans

(2010) Dimitrios G Zisoulis et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

Conserved microRNA targeting in Drosophila is as widespread in coding regions as in 3'UTRs

(2010) M. Schnall-Levin et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The Landscape of C. elegans 3'UTRs

(2010) M. Mangone et al.   SCIENCE

Nuclear functions of the HMG proteins

(2009) Raymond Reeves   Biochimica et Biophysica Acta-Gene Regulatory Mechanisms

The Sequence Alignment/Map format and SAMtools

(2009) H. Li et al.   BIOINFORMATICS

Repertoire and evolution of miRNA genes in four divergent nematode species

(2009) E. de Wit et al.   GENOME RESEARCH

Cloning and bioinformatic identification of small RNAs in the filarial nematode, Brugia malayi

(2009) Catherine B. Poole et al.   MOLECULAR AND BIOCHEMICAL PARASITOLOGY

Functional Analysis of the Cathepsin-Like Cysteine Protease Genes in Adult Brugia malayi Using RNA Interference

(2009) Louise Ford et al.   PLoS Neglected Tropical Diseases

Helminth infections: the great neglected tropical diseases

(2008) Peter J. Hotez et al.   JOURNAL OF CLINICAL INVESTIGATION

The impact of microRNAs on protein output

(2008) Daehyun Baek et al.   NATURE

The Pristionchus pacificus genome provides a unique perspective on nematode lifestyle and parasitism

(2008) Christoph Dieterich et al.   NATURE GENETICS

Design and delivery of antisense oligonucleotides to block microRNA function in cultured Drosophila and human cells

(2008) Michael D Horwich et al.   Nature Protocols

The let-7 family of microRNAs

(2008) Sarah Roush et al.   TRENDS IN CELL BIOLOGY