Characterization of the transcriptome of fast and slow muscle myotomal fibres in the pacu (Piaractus mesopotamicus)

Generation and characterization of the sea bass Dicentrarchus labrax brain and liver transcriptomes

(2014) Elodie Magnanou et al.   GENE

Systematic Variation in the Pattern of Gene Paralog Retention between the Teleost Superorders Ostariophysi and Acanthopterygii

(2014) Daniel Garcia de la serrana et al.   Genome Biology and Evolution

New insights into ubiquitin E3 ligase mechanism

(2014) Christopher E Berndsen et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

Ensembl 2015

(2014) Fiona Cunningham et al.   NUCLEIC ACIDS RESEARCH

A well-constrained estimate for the timing of the salmonid whole genome duplication reveals major decoupling from species diversification

(2014) D. J. Macqueen et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Growing knowledge of the mTOR signaling network

(2014) Kezhen Huang et al.   SEMINARS IN CELL & DEVELOPMENTAL BIOLOGY

Deep sequencing for de novo construction of a marine fish (Sparus aurata) transcriptome database with a large coverage of protein-coding transcripts

(2013) Josep A Calduch-Giner et al.   BMC GENOMICS

Gene expression profiling of the hyperplastic growth zones of the late trout embryo myotome using laser capture microdissection and microarray analysis

(2013) Pierre-Yves Rescan et al.   BMC GENOMICS

Revisiting the paradigm of myostatin in vertebrates: Insights from fishes

(2013) Jean-Charles Gabillard et al.   GENERAL AND COMPARATIVE ENDOCRINOLOGY

CAPNS1 Regulates USP1 Stability and Maintenance of Genome Integrity

(2013) F. Cataldo et al.   MOLECULAR AND CELLULAR BIOLOGY

MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability

(2013) K. Katoh et al.   MOLECULAR BIOLOGY AND EVOLUTION

De novo transcript sequence reconstruction from RNA-seq using the Trinity platform for reference generation and analysis

(2013) Brian J Haas et al.   Nature Protocols

Deep RNA Sequencing of the Skeletal Muscle Transcriptome in Swimming Fish

(2013) Arjan P. Palstra et al.   PLoS One

Characterisation and Expression of Calpain Family Members in Relation to Nutritional Status, Diet Composition and Flesh Texture in Gilthead Sea Bream (Sparus aurata)

(2013) Cristina Salmerón et al.   PLoS One

Expression of Heat Shock Protein (Hsp90) Paralogues Is Regulated by Amino Acids in Skeletal Muscle of Atlantic Salmon

(2013) Daniel Garcia de la serrana et al.   PLoS One

Skeletal muscle-specific T-tubule protein STAC3 mediates voltage-induced Ca2+ release and contractility

(2013) B. R. Nelson et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Fast skeletal muscle transcriptome of the Gilthead sea bream (Sparus aurata) determined by next generation sequencing

(2012) Daniel Garcia de la serrana et al.   BMC GENOMICS

Stac3 Is Required for Myotube Formation and Myogenic Differentiation in Vertebrate Skeletal Muscle

(2012) Neil I. Bower et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Experimental selection for body size at age modifies early life-history traits and muscle gene expression in adult zebrafish

(2012) I. P. G. Amaral et al.   JOURNAL OF EXPERIMENTAL BIOLOGY

E3 Ligases Determine Ubiquitination Site and Conjugate Type by Enforcing Specificity on E2 Enzymes

(2011) Yael David et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Growth and the regulation of myotomal muscle mass in teleost fish

(2011) I. A. Johnston et al.   JOURNAL OF EXPERIMENTAL BIOLOGY

Insulin-like growth factor (IGF) signalling and genome-wide transcriptional regulation in fast muscle of zebrafish following a single-satiating meal

(2011) I. P. G. Amaral et al.   JOURNAL OF EXPERIMENTAL BIOLOGY

Muscle-Specific RING Finger (MuRF) cDNAs in Atlantic Salmon (Salmo salar) and Their Role as Regulators of Muscle Protein Degradation

(2011) Luca Tacchi et al.   MARINE BIOTECHNOLOGY

MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods

(2011) K. Tamura et al.   MOLECULAR BIOLOGY AND EVOLUTION

During autophagy mitochondria elongate, are spared from degradation and sustain cell viability

(2011) Ligia C. Gomes et al.   NATURE CELL BIOLOGY

Teleost fish with specific genome duplication as unique models of vertebrate evolution

(2010) Yukuto Sato et al.   ENVIRONMENTAL BIOLOGY OF FISHES

Discovery and characterization of nutritionally regulated genes associated with muscle growth in Atlantic salmon

(2010) Neil I. Bower et al.   PHYSIOLOGICAL GENOMICS

Differential expression analysis for sequence count data

(2010) Simon Anders et al.   GENOME BIOLOGY

Insulin-like growth factor-I and genetic effects on indexes of protein degradation in response to feed deprivation in rainbow trout (Oncorhynchus mykiss)

(2009) Beth M. Cleveland et al.   AMERICAN JOURNAL OF PHYSIOLOGY-REGULATORY INTEGRATIVE AND COMPARATIVE PHYSIOLOGY

RING Domain E3 Ubiquitin Ligases

(2009) Raymond J. Deshaies et al.   Annual Review of Biochemistry

The MIQE Guidelines: Minimum Information for Publication of Quantitative Real-Time PCR Experiments

(2009) S. A. Bustin et al.   CLINICAL CHEMISTRY

Phasing of muscle gene expression with fasting-induced recovery growth in Atlantic salmon

(2009) Neil I Bower et al.   Frontiers in Zoology

Breaking the chains: structure and function of the deubiquitinases

(2009) David Komander et al.   NATURE REVIEWS MOLECULAR CELL BIOLOGY

Apoptosis signalling is essential and precedes protein degradation in wasting skeletal muscle during catabolic conditions

(2008) Josep M. Argilés et al.   INTERNATIONAL JOURNAL OF BIOCHEMISTRY & CELL BIOLOGY

Phylogeny.fr: robust phylogenetic analysis for the non-specialist

(2008) A. Dereeper et al.   NUCLEIC ACIDS RESEARCH

High-throughput functional annotation and data mining with the Blast2GO suite

(2008) S. Gotz et al.   NUCLEIC ACIDS RESEARCH

Targeting ubiquitin specific proteases for drug discovery

(2007) Laurent Daviet et al.   BIOCHIMIE

msatcommander: detection of microsatellite repeat arrays and automated, locus-specific primer design

(2007) BRANT C. FAIRCLOTH   Molecular Ecology Resources