Microbial diversity of the glass sponge Vazella pourtalesii in response to anthropogenic activities

Compositional and Quantitative Insights Into Bacterial and Archaeal Communities of South Pacific Deep-Sea Sponges (Demospongiae and Hexactinellida)

(2020) Georg Steinert et al.   Frontiers in Microbiology

Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2

(2019) Evan Bolyen et al.   NATURE BIOTECHNOLOGY

Antarctic sponges from the Terra Nova Bay (Ross Sea) host a diversified bacterial community

(2019) Serena Savoca et al.   Scientific Reports

Microbial conservation in the Anthropocene

(2018) Nicole S. Webster et al.   ENVIRONMENTAL MICROBIOLOGY

Microfouling development on artificial substrates deployed in the central Red Sea

(2018) Ahmed A. Balqadi et al.   OCEANOLOGIA

The sponge holobiont in a changing ocean: from microbes to ecosystems

(2018) L. Pita et al.   Microbiome

Optimizing taxonomic classification of marker-gene amplicon sequences with QIIME 2’s q2-feature-classifier plugin

(2018) Nicholas A. Bokulich et al.   Microbiome

Biosynthetic capacity, metabolic variety and unusual biology in the CPR and DPANN radiations

(2018) Cindy J. Castelle et al.   NATURE REVIEWS MICROBIOLOGY

Predicted distribution of the glass sponge Vazella pourtalesi on the Scotian Shelf and its persistence in the face of climatic variability

(2018) Lindsay Beazley et al.   PLoS One

In situ immune response and mechanisms of cell damage in central nervous system of fatal cases microcephaly by Zika virus

(2018) Raimunda S. S. Azevedo et al.   Scientific Reports

A review of the impacts of fisheries on open-ocean ecosystems

(2017) Guillermo Ortuño Crespo et al.   ICES JOURNAL OF MARINE SCIENCE

The sponge microbiome project

(2017) Lucas Moitinho-Silva et al.   GigaScience

MultiQC: summarize analysis results for multiple tools and samples in a single report

(2016) Philip Ewels et al.   BIOINFORMATICS

The deep-sea glass sponge L ophophysema eversa harbours potential symbionts responsible for the nutrient conversions of carbon, nitrogen and sulfur

(2016) Ren-Mao Tian et al.   ENVIRONMENTAL MICROBIOLOGY

Spicule and flagellated chamber formation in a growth zone ofAphrocallistes vastus(Porifera, Hexactinellida)

(2016) Amanda S. Kahn et al.   INVERTEBRATE BIOLOGY

DADA2: High-resolution sample inference from Illumina amplicon data

(2016) Benjamin J Callahan et al.   NATURE METHODS

Diversity, structure and convergent evolution of the global sponge microbiome

(2016) Torsten Thomas et al.   Nature Communications

Effects of light attenuation on the sponge holobiont- implications for dredging management

(2016) Mari-Carmen Pineda et al.   Scientific Reports

Host Biology in Light of the Microbiome: Ten Principles of Holobionts and Hologenomes

(2015) Seth R. Bordenstein et al.   PLOS BIOLOGY

Development of a Dual-Index Sequencing Strategy and Curation Pipeline for Analyzing Amplicon Sequence Data on the MiSeq Illumina Sequencing Platform

(2013) James J. Kozich et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Offshore marine renewable energy devices as stepping stones across biogeographical boundaries

(2013) Thomas P. Adams et al.   JOURNAL OF APPLIED ECOLOGY

Animals in a bacterial world, a new imperative for the life sciences

(2013) Margaret McFall-Ngai et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The SILVA ribosomal RNA gene database project: improved data processing and web-based tools

(2012) Christian Quast et al.   NUCLEIC ACIDS RESEARCH

Thermal and Sedimentation Stress Are Unlikely Causes of Brown Spot Syndrome in the Coral Reef Sponge, Ianthella basta

(2012) Heidi M. Luter et al.   PLoS One

Metaorganisms as the new frontier

(2011) Thomas C.G. Bosch et al.   ZOOLOGY

Metagenomic biomarker discovery and explanation

(2011) Nicola Segata et al.   GENOME BIOLOGY

FastTree 2 – Approximately Maximum-Likelihood Trees for Large Alignments

(2010) Morgan N. Price et al.   PLoS One

Global patterns of 16S rRNA diversity at a depth of millions of sequences per sample

(2010) J. G. Caporaso et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Glass sponges arrest pumping in response to sediment: implications for the physiology of the hexactinellid conduction system

(2008) Gabrielle J. Tompkins-MacDonald et al.   MARINE BIOLOGY