Transcriptome and metabolite profiling reveals the effects of Funneliformis mosseae on the roots of continuously cropped soybeans

Unraveling the metabolite signature of citrus showing defense response towards Candidatus Liberibacter asiaticus after application of endophyte Bacillus subtilis L1-21

(2020) Shahzad Munir et al.   MICROBIOLOGICAL RESEARCH

Transcriptional and metabolite analysis reveal a shift in direct and indirect defences in response to spider-mite infestation in cucumber (Cucumis sativus)

(2020) Jun He et al.   PLANT MOLECULAR BIOLOGY

Effects of manganese toxicity on the protein profile of tomato ( Solanum lycopersicum ) roots as revealed by two complementary proteomic approaches, two-dimensional electrophoresis and shotgun analysis

(2018) Laura Ceballos-Laita et al.   Journal of Proteomics

Effects of Funneliformis mosseae on Root Metabolites and Rhizosphere Soil Properties to Continuously-Cropped Soybean in the Potted-Experiments

(2018) Jia-Qi Cui et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Lignin Involvement in Programmed Changes in Peach-Fruit Texture Indicated by Metabolite and Transcriptome Analyses

(2018) Ying Wang et al.   JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY

Glucose-6-phosphate dehydrogenase as a target for highly efficient fatty acid biosynthesis in microalgae by enhancing NADPH supply

(2017) Jiao Xue et al.   METABOLIC ENGINEERING

Evaluating microbe-plant interactions and varietal differences for enhancing biocontrol efficacy in root rot disease challenged cotton crop

(2015) Santosh Babu et al.   EUROPEAN JOURNAL OF PLANT PATHOLOGY

Transcriptome and metabolome reprogramming in Vitis vinifera cv. Trincadeira berries upon infection with Botrytis cinerea

(2015) Patricia Agudelo-Romero et al.   JOURNAL OF EXPERIMENTAL BOTANY

Contribution of arbuscular mycorrhizal fungi and/or bacteria to enhancing plant drought tolerance under natural soil conditions: Effectiveness of autochthonous or allochthonous strains

(2015) N. Ortiz et al.   JOURNAL OF PLANT PHYSIOLOGY

The necrotrophic effector protein SnTox3 re-programs metabolism and elicits a strong defence response in susceptible wheat leaves

(2014) Britta Winterberg et al.   BMC PLANT BIOLOGY

Metabolomic Analysis Using Ultra-Performance Liquid Chromatography-Quadrupole-Time of Flight Mass Spectrometry (UPLC-Q-TOF MS) Uncovers the Effects of Light Intensity and Temperature under Shading Treatments on the Metabolites in Tea

(2014) Qunfeng Zhang et al.   PLoS One

MAPK Cascades in Plant Disease Resistance Signaling

(2013) Xiangzong Meng et al.   Annual Review of Phytopathology

Reflections on univariate and multivariate analysis of metabolomics data

(2013) Edoardo Saccenti et al.   Metabolomics

Liquid chromatography quadrupole time-of-flight mass spectrometry characterization of metabolites guided by the METLIN database

(2013) Zheng-Jiang Zhu et al.   Nature Protocols

Multiple factors influence the role of arbuscular mycorrhizal fungi in soil aggregation—a meta-analysis

(2013) Eva F. Leifheit et al.   PLANT AND SOIL

Mercator: a fast and simple web server for genome scale functional annotation of plant sequence data

(2013) MARC LOHSE et al.   PLANT CELL AND ENVIRONMENT

Comparative Transcriptome Profiling of a Resistant vs. Susceptible Tomato (Solanum lycopersicum) Cultivar in Response to Infection by Tomato Yellow Leaf Curl Virus

(2013) Tianzi Chen et al.   PLoS One

TopHat2: accurate alignment of transcriptomes in the presence of insertions, deletions and gene fusions

(2013) Daehwan Kim et al.   GENOME BIOLOGY

The role of flavonoids in root-rhizosphere signalling: opportunities and challenges for improving plant-microbe interactions

(2012) S. Hassan et al.   JOURNAL OF EXPERIMENTAL BOTANY

HMDB 3.0—The Human Metabolome Database in 2013

(2012) David S. Wishart et al.   NUCLEIC ACIDS RESEARCH

Verticillium longisporum Infection Affects the Leaf Apoplastic Proteome, Metabolome, and Cell Wall Properties in Arabidopsis thaliana

(2012) Saskia Floerl et al.   PLoS One

Mitogen-Activated Protein Kinase Signaling in Plants

(2010) Maria Cristina et al.   Annual Review of Plant Biology

A rapid TRIzol-based two-step method for DNA-free RNA extraction from Arabidopsis siliques and dry seeds

(2010) Ling Meng et al.   Biotechnology Journal

Characterization of a Stress-induced NADP-isocitrate Dehydrogenase Gene in Maize Confers Salt Tolerance in Arabidopsis

(2010) Yinghui Liu et al.   JOURNAL OF PLANT BIOLOGY

Gene ontology analysis for RNA-seq: accounting for selection bias

(2010) Matthew D Young et al.   GENOME BIOLOGY

A Renaissance of Elicitors: Perception of Microbe-Associated Molecular Patterns and Danger Signals by Pattern-Recognition Receptors

(2009) Thomas Boller et al.   Annual Review of Plant Biology

Differential expression of CHS7 and CHS8 genes in soybean

(2009) Jinxin Yi et al.   PLANTA

Transcript and metabolite profiling of the adaptive response to mild decreases in oxygen concentration in the roots of arabidopsis plants

(2008) Joost T. van Dongen et al.   ANNALS OF BOTANY