Genome-wide patterns of differentiation within and among U.S. commercial honey bee stocks

Integrative Genomics Reveals the Genetics and Evolution of the Honey Bee’s Social Immune System

(2019) Brock A Harpur et al.   Genome Biology and Evolution

Grooming behavior and gene expression of the Indiana “mite-biter” honey bee stock

(2019) Nuria Morfin et al.   APIDOLOGIE

The Complex Demographic History and Evolutionary Origin of the Western Honey Bee, Apis Mellifera

(2017) Julie M. Cridland et al.   Genome Biology and Evolution

Expression analysis of genes putatively associated with hygienic behavior in selected stocks of Apis mellifera L. from Argentina

(2017) A. C. Scannapieco et al.   INSECTES SOCIAUX

Tracking the Genetic Stability of a Honey Bee (Hymenoptera: Apidae) Breeding Program With Genetic Markers

(2017) Lelania Bourgeois et al.   JOURNAL OF ECONOMIC ENTOMOLOGY

Genomewide analysis of admixture and adaptation in the Africanized honeybee

(2017) Ronald M. Nelson et al.   MOLECULAR ECOLOGY

A soft selective sweep during rapid evolution of gentle behaviour in an Africanized honeybee

(2017) Arian Avalos et al.   Nature Communications

Peptide biomarkers used for the selective breeding of a complex polygenic trait in honey bees

(2017) M. Marta Guarna et al.   Scientific Reports

Two extended haplotype blocks are associated with adaptation to high altitude habitats in East African honey bees

(2017) Andreas Wallberg et al.   PLoS Genetics

Identification of Multiple Loci Associated with Social Parasitism in Honeybees

(2016) Andreas Wallberg et al.   PLoS Genetics

An invasive social insect overcomes genetic load at the sex locus

(2016) Rosalyn Gloag et al.   Nature Ecology & Evolution

Selection of VSH-derived “Pol-line” honey bees and evaluation of their Varroa-resistance characteristics

(2015) Robert G. Danka et al.   APIDOLOGIE

A search for protein biomarkers links olfactory signal transduction to social immunity

(2015) Maria Guarna et al.   BMC GENOMICS

Differential gene expression between hygienic and non-hygienic honeybee (Apis mellifera L.) hives

(2015) Sébastien Boutin et al.   BMC GENOMICS

Hymenoptera Genome Database: integrating genome annotations in HymenopteraMine

(2015) Christine G. Elsik et al.   NUCLEIC ACIDS RESEARCH

Phenotypic and Genetic Analyses of the Varroa Sensitive Hygienic Trait in Russian Honey Bee (Hymenoptera: Apidae) Colonies

(2015) Maria J. Kirrane et al.   PLoS One

Composite selection signals can localize the trait specific genomic regions in multi-breed populations of cattle and sheep

(2014) Imtiaz Ahmed Randhawa et al.   BMC GENETICS

A worldwide survey of genome sequence variation provides insight into the evolutionary history of the honeybee Apis mellifera

(2014) Andreas Wallberg et al.   NATURE GENETICS

Sequencing pools of individuals — mining genome-wide polymorphism data without big funding

(2014) Christian Schlötterer et al.   NATURE REVIEWS GENETICS

Genomics and host specialization of honey bee and bumble bee gut symbionts

(2014) W. K. Kwong et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Identification of developmentally-specific kinotypes and mechanisms of Varroa mite resistance through whole-organism, kinome analysis of honeybee

(2014) Albert J. Robertson et al.   Frontiers in Genetics

Varying congruence of hygienic responses to Varroa destructor and freeze-killed brood among different types of honeybees

(2013) Robert G. Danka et al.   APIDOLOGIE

Genetic diversity affects colony survivorship in commercial honey bee colonies

(2013) David R. Tarpy et al.   NATURWISSENSCHAFTEN

A high-performance computing toolset for relatedness and principal component analysis of SNP data

(2012) X. Zheng et al.   BIOINFORMATICS

Management increases genetic diversity of honey bees via admixture

(2012) BROCK A. HARPUR et al.   MOLECULAR ECOLOGY

LoFreq: a sequence-quality aware, ultra-sensitive variant caller for uncovering cell-population heterogeneity from high-throughput sequencing datasets

(2012) Andreas Wilm et al.   NUCLEIC ACIDS RESEARCH

High-Resolution Linkage Analyses to Identify Genes That Influence Varroa Sensitive Hygiene Behavior in Honey Bees

(2012) Jennifer M. Tsuruda et al.   PLoS One

Correlation of proteome-wide changes with social immunity behaviors provides insight into resistance to the parasitic mite, Varroa destructor, in the honey bee (Apis mellifera)

(2012) Robert Parker et al.   GENOME BIOLOGY

Scientific note on PCR inhibitors in the compound eyes of honey bees, Apis mellifera

(2011) Humberto Boncristiani et al.   APIDOLOGIE

PoPoolation2: identifying differentiation between populations using sequencing of pooled DNA samples (Pool-Seq)

(2011) R. Kofler et al.   BIOINFORMATICS

Development of a 44K SNP assay focussing on the analysis of a varroa-specific defence behaviour in honey bees (Apis mellifera carnica)

(2011) A. SPÖTTER et al.   Molecular Ecology Resources

A framework for variation discovery and genotyping using next-generation DNA sequencing data

(2011) Mark A DePristo et al.   NATURE GENETICS

PoPoolation: A Toolbox for Population Genetic Analysis of Next Generation Sequencing Data from Pooled Individuals

(2011) Robert Kofler et al.   PLoS One

The Genome Analysis Toolkit: A MapReduce framework for analyzing next-generation DNA sequencing data

(2010) A. McKenna et al.   GENOME RESEARCH

Genetic Stock Identification of Russian Honey Bees

(2010) Lelania Bourgeois et al.   JOURNAL OF ECONOMIC ENTOMOLOGY

Six quantitative trait loci influence task thresholds for hygienic behaviour in honeybees (Apis mellifera)

(2010) PETER R. OXLEY et al.   MOLECULAR ECOLOGY

Genetic Characterization of Commercial Honey Bee (Hymenoptera: Apidae) Populations in the United States by Using Mitochondrial and Microsatellite Markers

(2009) D. A. Delaney et al.   ANNALS OF THE ENTOMOLOGICAL SOCIETY OF AMERICA

Population genetic structure of coastal Croatian honeybees (Apis mellifera carnica)

(2009) Irene Muñoz et al.   APIDOLOGIE

Fast and accurate short read alignment with Burrows-Wheeler transform

(2009) H. Li et al.   BIOINFORMATICS

Genetic Characterization of Russian Honey Bee Stock Selected for Improved Resistance to Varroa destructor

(2009) A. Lelania Bourgeois et al.   JOURNAL OF ECONOMIC ENTOMOLOGY

A historical review of managed honey bee populations in Europe and the United States and the factors that may affect them

(2009) Dennis vanEngelsdorp et al.   JOURNAL OF INVERTEBRATE PATHOLOGY

Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources

(2009) Da Wei Huang et al.   Nature Protocols

Natural selection has driven population differentiation in modern humans

(2008) Luis B Barreiro et al.   NATURE GENETICS

Bioinformatics enrichment tools: paths toward the comprehensive functional analysis of large gene lists

(2008) Da Wei Huang et al.   NUCLEIC ACIDS RESEARCH

Sex Determination in the Hymenoptera

(2007) George E. Heimpel et al.   Annual Review of Entomology