A high-density SNP-based genetic map and several economic traits-related loci in Pelteobagrus vachelli
Published 2020 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
A high-density SNP-based genetic map and several economic traits-related loci in Pelteobagrus vachelli
Authors
Keywords
-
Journal
BMC GENOMICS
Volume 21, Issue 1, Pages -
Publisher
Springer Science and Business Media LLC
Online
2020-10-08
DOI
10.1186/s12864-020-07115-7
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- A high-resolution genetic linkage map and QTL fine mapping for growth-related traits and sex in the Yangtze River common carp (Cyprinus carpio haematopterus)
- (2018) Xiu Feng et al. BMC GENOMICS
- Restriction site-associated DNA sequencing for SNP discovery and high-density genetic map construction in southern catfish ( Silurus meridionalis )
- (2018) Mimi Xie et al. Royal Society Open Science
- A novel PDZ domain-containing gene is essential for male sex differentiation and maintenance in yellow catfish (Pelteobagrus fulvidraco)
- (2018) Cheng Dan et al. Science Bulletin
- R/qtl2: Software for Mapping Quantitative Trait Loci with High-Dimensional Data and Multi-parent Populations
- (2018) Karl W. Broman et al. GENETICS
- Diverse and variable sex determination mechanisms in vertebrates
- (2018) Xi-Yin Li et al. Science China-Life Sciences
- Deciphering transcriptome profile of the yellow catfish ( Pelteobagrus fulvidraco ) in response to Edwardsiella ictaluri
- (2017) Rong Zhu et al. FISH & SHELLFISH IMMUNOLOGY
- Transcriptome analysis of the spleen of the darkbarbel catfish Pelteobagrus vachellii in response to Aeromonas hydrophila infection
- (2017) Chuanjie Qin et al. FISH & SHELLFISH IMMUNOLOGY
- Effects of acute and chronic hypoxia on acid–base regulation, hematology, ion, and osmoregulation of juvenile American paddlefish
- (2017) Daniel L. Aboagye et al. JOURNAL OF COMPARATIVE PHYSIOLOGY B-BIOCHEMICAL SYSTEMIC AND ENVIRONMENTAL PHYSIOLOGY
- Identification of HIF-1 signaling pathway in Pelteobagrus vachelli using RNA-Seq: effects of acute hypoxia and reoxygenation on oxygen sensors, respiratory metabolism, and hematology indices
- (2017) Guosong Zhang et al. JOURNAL OF COMPARATIVE PHYSIOLOGY B-BIOCHEMICAL SYSTEMIC AND ENVIRONMENTAL PHYSIOLOGY
- Genome-Wide Association Study Reveals Multiple Novel QTL Associated with Low Oxygen Tolerance in Hybrid Catfish
- (2017) Xiaoxiao Zhong et al. MARINE BIOTECHNOLOGY
- A KASP Genotyping Method to Identify Northern Watermilfoil, Eurasian Watermilfoil, and Their Interspecific Hybrids
- (2017) Eric L. Patterson et al. Frontiers in Plant Science
- Construction of a high-density linkage map and fine mapping of QTLs for growth and gonad related traits in blunt snout bream
- (2017) Shi-Ming Wan et al. Scientific Reports
- Mapping the sex determination locus in the hāpuku (Polyprion oxygeneios) using ddRAD sequencing
- (2016) Jeremy K. Brown et al. BMC GENOMICS
- Modulated expression and enzymatic activities of Darkbarbel catfish, Pelteobagrus vachelli for oxidative stress induced by acute hypoxia and reoxygenation
- (2016) Guosong Zhang et al. CHEMOSPHERE
- Sox3 binds to 11β-hydroxysteroid dehydrogenase gene promoter suggesting transcriptional interaction in catfish
- (2016) Anbazhagan Rajakumar et al. JOURNAL OF STEROID BIOCHEMISTRY AND MOLECULAR BIOLOGY
- Multiple across-strain and within-strain QTLs suggest highly complex genetic architecture for hypoxia tolerance in channel catfish
- (2016) Xiaozhu Wang et al. MOLECULAR GENETICS AND GENOMICS
- GWAS analysis of QTL for enteric septicemia of catfish and their involved genes suggest evolutionary conservation of a molecular mechanism of disease resistance
- (2016) Tao Zhou et al. MOLECULAR GENETICS AND GENOMICS
- Integrated analysis of mRNA-seq and miRNA-seq in the liver of Pelteobagrus vachelli in response to hypoxia
- (2016) Guosong Zhang et al. Scientific Reports
- A high-density genetic map and growth related QTL mapping in bighead carp (Hypophthalmichthys nobilis)
- (2016) Beide Fu et al. Scientific Reports
- High-density interspecific genetic linkage mapping provides insights into genomic incompatibility between channel catfish and blue catfish
- (2015) S. Liu et al. ANIMAL GENETICS
- The effects of water temperature and stocking density on survival, feeding and growth of the juveniles of the hybrid yellow catfish from Pelteobagrus fulvidraco (♀) × Pelteobagrus vachelli (♂)
- (2015) Guosong Zhang et al. AQUACULTURE RESEARCH
- Effects of 17α-Methyltestosterone and Aromatase Inhibitor Letrozole on Sex Reversal, Gonadal Structure, and Growth in Yellow Catfish Pelteobagrus fulvidraco
- (2015) Zhi-Gang Shen et al. BIOLOGICAL BULLETIN
- Biological Roles of Hydroxysteroid (11-Beta) Dehydrogenase 1 (HSD11B1), HSD11B2, and Glucocorticoid Receptor (NR3C1) in Sheep Conceptus Elongation1
- (2015) Kelsey Brooks et al. BIOLOGY OF REPRODUCTION
- Genome-wide SNP identification for the construction of a high-resolution genetic map of Japanese flounder (Paralichthys olivaceus): applications to QTL mapping of Vibrio anguillarum disease resistance and comparative genomic analysis
- (2015) C. Shao et al. DNA RESEARCH
- Identification of Multiple QTL Hotspots in Sockeye Salmon (Oncorhynchus nerka) Using Genotyping-by-Sequencing and a Dense Linkage Map
- (2015) Wesley A. Larson et al. JOURNAL OF HEREDITY
- The hypoxia signaling pathway and hypoxic adaptation in fishes
- (2015) Wuhan Xiao Science China-Life Sciences
- Genetic basis and biotechnological manipulation of sexual dimorphism and sex determination in fish
- (2015) Jie Mei et al. Science China-Life Sciences
- Construction of a high-density linkage map and fine mapping of QTL for growth in Asian seabass
- (2015) Le Wang et al. Scientific Reports
- High-Density Genetic Linkage Mapping in Turbot (Scophthalmus maximus L.) Based on SNP Markers and Major Sex- and Growth-Related Regions Detection
- (2015) Weiji Wang et al. PLoS One
- Trimmomatic: a flexible trimmer for Illumina sequence data
- (2014) Anthony M. Bolger et al. BIOINFORMATICS
- A ddRAD-based genetic map and its integration with the genome assembly of Japanese eel (Anguilla japonica) provides insights into genome evolution after the teleost-specific genome duplication
- (2014) Wataru Kai et al. BMC GENOMICS
- Detection and mapping of QTL for temperature tolerance and body size in Chinook salmon (Oncorhynchus tshawytscha) using genotyping by sequencing
- (2014) Meredith V. Everett et al. Evolutionary Applications
- Construction and Analysis of High-Density Linkage Map Using High-Throughput Sequencing Data
- (2014) Dongyuan Liu et al. PLoS One
- A RAD-based linkage map and comparative genomics in the gudgeons (genus Gnathopogon, Cyprinidae)
- (2013) Ryo Kakioka et al. BMC GENOMICS
- Mapping the sex determination locus in the Atlantic halibut (Hippoglossus hippoglossus) using RAD sequencing
- (2013) Christos Palaiokostas et al. BMC GENOMICS
- Genetic Differentiation and Efficient Sex-specific Marker Development of a Pair of Y- and X-linked Markers in Yellow Catfish
- (2013) Cheng Dan et al. International Journal of Biological Sciences
- Stacks: an analysis tool set for population genomics
- (2013) Julian Catchen et al. MOLECULAR ECOLOGY
- Correction: Mapping and Validation of the Major Sex-Determining Region in Nile Tilapia (Oreochromis niloticus L.) Using RAD Sequencing
- (2013) Christos Palaiokostas et al. PLoS One
- Genetic Manipulation of Sex Ratio for the Large-Scale Breeding of YY Super-Male and XY All-Male Yellow Catfish (Pelteobagrus fulvidraco (Richardson))
- (2012) Hanqin Liu et al. MARINE BIOTECHNOLOGY
- Double Digest RADseq: An Inexpensive Method for De Novo SNP Discovery and Genotyping in Model and Non-Model Species
- (2012) Brant K. Peterson et al. PLoS One
- Endothelial Semaphorin 7A promotes neutrophil migration during hypoxia
- (2012) J. C. Morote-Garcia et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Quantitative Trait Loci Involved in Sex Determination and Body Growth in the Gilthead Sea Bream (Sparus aurata L.) through Targeted Genome Scan
- (2011) Dimitrios Loukovitis et al. PLoS One
- Cloning, expression and enzyme activity analysis of testicular 11β-hydroxysteroid dehydrogenase during seasonal cycle and after hCG induction in air-breathing catfish Clarias gariepinus
- (2010) M.K. Rasheeda et al. JOURNAL OF STEROID BIOCHEMISTRY AND MOLECULAR BIOLOGY
- Identifying Signatures of Natural Selection in Tibetan and Andean Populations Using Dense Genome Scan Data
- (2010) Abigail Bigham et al. PLoS Genetics
- Isolation of Y- and X-linked SCAR markers in yellow catfish and application in the production of all-male populations
- (2009) D. Wang et al. ANIMAL GENETICS
- Duplication and distinct expression patterns of two thrombospondin-1 isoforms in teleost fishes
- (2009) Feng-Rui Wu et al. GENE EXPRESSION PATTERNS
- Construction of Genetic Linkage Maps and Comparative Genome Analysis of Catfish Using Gene-Associated Markers
- (2009) H. Kucuktas et al. GENETICS
Discover Peeref hubs
Discuss science. Find collaborators. Network.
Join a conversationBecome a Peeref-certified reviewer
The Peeref Institute provides free reviewer training that teaches the core competencies of the academic peer review process.
Get Started