pH-dependent transcriptional profile changes in iron-deficient Arabidopsis roots

Understanding the Complexity of Iron Sensing and Signaling Cascades in Plants

(2019) Takanori Kobayashi   PLANT AND CELL PHYSIOLOGY

The SAUR41 subfamily of SMALL AUXIN UP RNA genes is abscisic acid inducible to modulate cell expansion and salt tolerance in Arabidopsis thaliana seedlings

(2019) Ting Qiu et al.   ANNALS OF BOTANY

The iron deficiency response in Arabidopsis thaliana requires the phosphorylated transcription factor URI

(2019) Sun A. Kim et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Scopoletin 8-hydroxylase: a novel enzyme involved in coumarin biosynthesis and iron-deficiency responses in Arabidopsis

(2018) Joanna Siwinska et al.   JOURNAL OF EXPERIMENTAL BOTANY

Biosynthesis of redox-active metabolites in response to iron deficiency in plants

(2018) Jakub Rajniak et al.   Nature Chemical Biology

Scopoletin 8-Hydroxylase-Mediated Fraxetin Production is Crucial for Iron Mobilization

(2018) Huei-Hsuan Tsai et al.   PLANT PHYSIOLOGY

agriGO v2.0: a GO analysis toolkit for the agricultural community, 2017 update

(2017) Tian Tian et al.   NUCLEIC ACIDS RESEARCH

Low phosphate activates STOP1-ALMT1 to rapidly inhibit root cell elongation

(2017) Coline Balzergue et al.   Nature Communications

Accumulation and Secretion of Coumarinolignans and other Coumarins in Arabidopsis thaliana Roots in Response to Iron Deficiency at High pH

(2016) Patricia Sisó-Terraza et al.   Frontiers in Plant Science

STOP2 Activates Transcription of Several Genes for Al- and Low pH-Tolerance that Are Regulated by STOP1 in Arabidopsis

(2013) Yuriko Kobayashi et al.   Molecular Plant

Tissue-Specific Expression of SMALL AUXIN UP RNA41 Differentially Regulates Cell Expansion and Root Meristem Patterning in Arabidopsis

(2013) Yingying Kong et al.   PLANT AND CELL PHYSIOLOGY

Mutually Exclusive Alterations in Secondary Metabolism Are Critical for the Uptake of Insoluble Iron Compounds by Arabidopsis and Medicago truncatula

(2013) J. Rodriguez-Celma et al.   PLANT PHYSIOLOGY

A novel putative auxin carrier family regulates intracellular auxin homeostasis in plants

(2012) Elke Barbez et al.   NATURE

Fast gapped-read alignment with Bowtie 2

(2012) Ben Langmead et al.   NATURE METHODS

REVIGO Summarizes and Visualizes Long Lists of Gene Ontology Terms

(2011) Fran Supek et al.   PLoS One

A hitchhiker’s guide to the Arabidopsis ferrome

(2010) Wolfgang Schmidt et al.   PLANT PHYSIOLOGY AND BIOCHEMISTRY

A scaling normalization method for differential expression analysis of RNA-seq data

(2010) Mark D Robinson et al.   GENOME BIOLOGY

FIT interacts with AtbHLH38 and AtbHLH39 in regulating iron uptake gene expression for iron homeostasis in Arabidopsis

(2008) Youxi Yuan et al.   CELL RESEARCH