The geographic mosaic of arms race coevolution is closely matched to prey population structure

Sex linkage of the skeletal muscle sodium channel gene (SCN4A) explains apparent deviations from Hardy–Weinberg equilibrium of tetrodotoxin-resistance alleles in garter snakes (Thamnophis sirtalis)

(2020) Kerry L. Gendreau et al.   HEREDITY

The skin microbiome facilitates adaptive tetrodotoxin production in poisonous newts

(2020) Patric M Vaelli et al.   eLife

ZW, XY, and yet ZW: Sex chromosome evolution in snakes even more complicated

(2018) Barbora Augstenová et al.   EVOLUTION

Local prey community composition and genetic distance predict venom divergence among populations of the northern Pacific rattlesnake (Crotalus oreganus )

(2018) Matthew L. Holding et al.   JOURNAL OF EVOLUTIONARY BIOLOGY

Multi-allelic exact tests for Hardy-Weinberg equilibrium that account for gender

(2018) Jan Graffelman et al.   Molecular Ecology Resources

Convergent adaptation to dangerous prey proceeds through the same first-step mutation in the garter snake Thamnophis sirtalis

(2017) Michael T.J. Hague et al.   EVOLUTION

On the testing of Hardy-Weinberg proportions and equality of allele frequencies in males and females at biallelic genetic markers

(2017) Jan Graffelman et al.   GENETIC EPIDEMIOLOGY

Genomic variation across two barn swallow hybrid zones reveals traits associated with divergence in sympatry and allopatry

(2017) Elizabeth S. C. Scordato et al.   MOLECULAR ECOLOGY

pophelper: an R package and web app to analyse and visualize population structure

(2016) R. M. Francis   Molecular Ecology Resources

Toxicity and population structure of the Rough-Skinned Newt (Taricha granulosa) outside the range of an arms race with resistant predators

(2016) Michael T.J. Hague et al.   Ecology and Evolution

Is there more than one way to skin a newt? Convergent toxin resistance in snakes is not due to a common genetic mechanism

(2015) C R Feldman et al.   HEREDITY

Fitting Linear Mixed-Effects Models Usinglme4

(2015) Douglas Bates et al.   Journal of Statistical Software

Seven common mistakes in population genetics and how to avoid them

(2015) Patrick G. Meirmans   MOLECULAR ECOLOGY

Should the Mantel test be used in spatial analysis?

(2015) Pierre Legendre et al.   Methods in Ecology and Evolution

GENOMIC AND MORPHOLOGICAL ANALYSIS OF A SEMIPERMEABLE AVIAN HYBRID ZONE SUGGESTS ASYMMETRICAL INTROGRESSION OF A SEXUAL SIGNAL

(2014) Daniel T. Baldassarre et al.   EVOLUTION

Isolation by environment

(2014) Ian J. Wang et al.   MOLECULAR ECOLOGY

Reanalysis suggests that genomic islands of speciation are due to reduced diversity, not reduced gene flow

(2014) Tami E. Cruickshank et al.   MOLECULAR ECOLOGY

DISENTANGLING THE EFFECTS OF GEOGRAPHIC AND ECOLOGICAL ISOLATION ON GENETIC DIFFERENTIATION

(2013) Gideon S. Bradburd et al.   EVOLUTION

Current approaches using genetic distances produce poor estimates of landscape resistance to interindividual dispersal

(2013) Tabitha A. Graves et al.   MOLECULAR ECOLOGY

Stacks: an analysis tool set for population genomics

(2013) Julian Catchen et al.   MOLECULAR ECOLOGY

StAMPP: an R package for calculation of genetic differentiation and structure of mixed-ploidy level populations

(2013) Luke W. Pembleton et al.   Molecular Ecology Resources

hzar: hybrid zone analysis using an R software package

(2013) Elizabeth P. Derryberry et al.   Molecular Ecology Resources

Dismantling the Mantel tests

(2013) Gilles Guillot et al.   Methods in Ecology and Evolution

Comparative Sex Chromosome Genomics in Snakes: Differentiation, Evolutionary Strata, and Lack of Global Dosage Compensation

(2013) Beatriz Vicoso et al.   PLOS BIOLOGY

An improved competitive inhibition enzymatic immunoassay method for tetrodotoxin quantification

(2012) Amber N Stokes et al.   BIOLOGICAL PROCEDURES ONLINE

Fast gapped-read alignment with Bowtie 2

(2012) Ben Langmead et al.   NATURE METHODS

Double Digest RADseq: An Inexpensive Method for De Novo SNP Discovery and Genotyping in Model and Non-Model Species

(2012) Brant K. Peterson et al.   PLoS One

The molecular mystique of tetrodotoxin

(2012) Edward G. Moczydlowski   TOXICON

Contemporary and historical evolutionary processes interact to shape patterns of within-lake phenotypic divergences in polyphenic pumpkinseed sunfish,Lepomis gibbosus

(2012) Dylan J. Weese et al.   Ecology and Evolution

METAPOPULATION STRUCTURE OF A SEED-PREDATOR WEEVIL AND ITS HOST PLANT IN ARMS RACE COEVOLUTION

(2011) Hirokazu Toju et al.   EVOLUTION

Tetrodotoxin levels in larval and metamorphosed newts (Taricha granulosa) and palatability to predatory dragonflies

(2011) Brian G. Gall et al.   TOXICON

STRUCTURE HARVESTER: a website and program for visualizing STRUCTURE output and implementing the Evanno method

(2011) Dent A. Earl et al.   Conservation Genetics Resources

Tetrodotoxin affects survival probability of rough-skinned newts (Taricha granulosa) faced with TTX-resistant garter snake predators (Thamnophis sirtalis)

(2010) Becky L. Williams et al.   CHEMOECOLOGY

The Chemical and Evolutionary Ecology of Tetrodotoxin (TTX) Toxicity in Terrestrial Vertebrates

(2010) Charles T. Hanifin   Marine Drugs

Comparison of the Mantel test and alternative approaches for detecting complex multivariate relationships in the spatial analysis of genetic data

(2010) PIERRE LEGENDRE et al.   Molecular Ecology Resources

Arlequin suite ver 3.5: a new series of programs to perform population genetics analyses under Linux and Windows

(2010) LAURENT EXCOFFIER et al.   Molecular Ecology Resources

Testing the significance of canonical axes in redundancy analysis

(2010) Pierre Legendre et al.   Methods in Ecology and Evolution

Statistical approaches in landscape genetics: an evaluation of methods for linking landscape and genetic data

(2009) Niko Balkenhol et al.   ECOGRAPHY

Divergent selection and heterogeneous genomic divergence

(2009) PATRIK NOSIL et al.   MOLECULAR ECOLOGY

Adaptation and colonization history affect the evolution of clines in two introduced species

(2009) Stephen R. Keller et al.   NEW PHYTOLOGIST

A Genome-Scan Method to Identify Selected Loci Appropriate for Both Dominant and Codominant Markers: A Bayesian Perspective

(2008) M. Foll et al.   GENETICS

Tetrodotoxin – Distribution and Accumulation in Aquatic Organisms, and Cases of Human Intoxication

(2008) Tamao Noguchi   Marine Drugs

Phenotypic Mismatches Reveal Escape from Arms-Race Coevolution

(2008) Charles T Hanifin et al.   PLOS BIOLOGY