Mapping of host-parasite-microbiome interactions reveals metabolic determinants of tropism and tolerance in Chagas disease

Global chemical effects of the microbiome include new bile-acid conjugations

(2020) Robert A. Quinn et al.   NATURE

The fecal, oral, and skin microbiota of children with Chagas disease treated with benznidazole

(2019) Carlos Robello et al.   PLoS One

Diet Alters Serum Metabolomic Profiling in the Mouse Model of Chronic Chagas Cardiomyopathy

(2019) Kezia Lizardo et al.   DISEASE MARKERS

Disease tolerance: concept and mechanisms

(2018) JL McCarville et al.   CURRENT OPINION IN IMMUNOLOGY

Cardiac metabolism — A promising therapeutic target for heart failure

(2018) Hannah Noordali et al.   PHARMACOLOGY & THERAPEUTICS

Experimental Chagas disease-induced perturbations of the fecal microbiome and metabolome

(2018) Laura-Isobel McCall et al.   PLoS Neglected Tropical Diseases

Expanding the toolbox for Trypanosoma cruzi: A parasite line incorporating a bioluminescence-fluorescence dual reporter and streamlined CRISPR/Cas9 functionality for rapid in vivo localisation and phenotyping

(2018) Fernanda Cristina Costa et al.   PLoS Neglected Tropical Diseases

ROS and Trypanosoma cruzi: Fuel to infection, poison to the heart

(2018) Claudia N. Paiva et al.   PLoS Pathogens

Spontaneous dormancy protects Trypanosoma cruzi during extended drug exposure

(2018) Fernando J Sánchez-Valdéz et al.   eLife

Antibodies Set Boundaries Limiting Microbial Metabolite Penetration and the Resultant Mammalian Host Response

(2018) Yasuhiro Uchimura et al.   IMMUNITY

Introducing EzBioCloud: a taxonomically united database of 16S rRNA gene sequences and whole-genome assemblies

(2017)   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

3D molecular cartography using LC–MS facilitated by Optimus and 'ili software

(2017) Ivan Protsyuk et al.   Nature Protocols

Sharing and community curation of mass spectrometry data with Global Natural Products Social Molecular Networking

(2016) Mingxun Wang et al.   NATURE BIOTECHNOLOGY

Here, There, and Everywhere: The Ubiquitous Distribution of the Immunosignaling Molecule Lysophosphatidylcholine and Its Role on Chagas Disease

(2016) Mário Alberto C. Silva-Neto et al.   Frontiers in Immunology

Limited Ability of Posaconazole To Cure both Acute and Chronic Trypanosoma cruzi Infections Revealed by Highly SensitiveIn VivoImaging

(2015) Amanda Fortes Francisco et al.   ANTIMICROBIAL AGENTS AND CHEMOTHERAPY

Error filtering, pair assembly and error correction for next-generation sequencing reads

(2015) Robert C. Edgar et al.   BIOINFORMATICS

Gut Microbiome Diversity among Cheyenne and Arapaho Individuals from Western Oklahoma

(2015) Krithivasan Sankaranarayanan et al.   CURRENT BIOLOGY

Bioluminescence imaging of chronicTrypanosoma cruziinfections reveals tissue-specific parasite dynamics and heart disease in the absence of locally persistent infection

(2014) Michael D. Lewis et al.   CELLULAR MICROBIOLOGY

Global Metabolomic Profiling of Acute Myocarditis Caused by Trypanosoma cruzi Infection

(2014) Núria Gironès et al.   PLoS Neglected Tropical Diseases

Synergy Testing of FDA-Approved Drugs Identifies Potent Drug Combinations against Trypanosoma cruzi

(2014) Joseph D. Planer et al.   PLoS Neglected Tropical Diseases

EMPeror: a tool for visualizing high-throughput microbial community data

(2013) Yoshiki Vázquez-Baeza et al.   GigaScience

A cross-platform toolkit for mass spectrometry and proteomics

(2012) Matthew C Chambers et al.   NATURE BIOTECHNOLOGY

Metabolomics: the apogee of the omics trilogy

(2012) Gary J. Patti et al.   NATURE REVIEWS MOLECULAR CELL BIOLOGY

3-Hydroxy Kynurenine Treatment Controls T. cruzi Replication and the Inflammatory Pathology Preventing the Clinical Symptoms of Chronic Chagas Disease

(2011) Carolina P. Knubel et al.   PLoS One

Regulation of Inflammation by Short Chain Fatty Acids

(2011) Marco A.R. Vinolo et al.   Nutrients

MZmine 2: Modular framework for processing, visualizing, and analyzing mass spectrometry-based molecular profile data

(2010) Tomáš Pluskal et al.   BMC BIOINFORMATICS

Chagas disease

(2010) Anis Rassi et al.   LANCET

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS