Phenotypic convergence in bacterial adaptive evolution to ethanol stress

Grandparental effects in marine sticklebacks: transgenerational plasticity across multiple generations

(2014) L. N. S. Shama et al.   JOURNAL OF EVOLUTIONARY BIOLOGY

Prediction of antibiotic resistance by gene expression profiles

(2014) Shingo Suzuki et al.   Nature Communications

Memory and Fitness Optimization of Bacteria under Fluctuating Environments

(2014) Guillaume Lambert et al.   PLoS Genetics

Integrated transcriptomic and metabolomic analysis of the central metabolism ofSynechocystissp. PCC 6803 under different trophic conditions

(2013) Katsunori Yoshikawa et al.   Biotechnology Journal

Development of a Physical Model-Based Algorithm for the Detection of Single-Nucleotide Substitutions by Using Tiling Microarrays

(2013) Naoaki Ono et al.   PLoS One

The Molecular Diversity of Adaptive Convergence

(2012) O. Tenaillon et al.   SCIENCE

Thermal legacies: transgenerational effects of temperature on growth in a vertebrate

(2011) Santiago Salinas et al.   ECOLOGY LETTERS

Microbial domestication signatures of Lactococcus lactis can be reproduced by experimental evolution

(2011) H. Bachmann et al.   GENOME RESEARCH

Evolutionary paths to antibiotic resistance under dynamically sustained drug selection

(2011) Erdal Toprak et al.   NATURE GENETICS

Beyond DNA: integrating inclusive inheritance into an extended theory of evolution

(2011) Étienne Danchin et al.   NATURE REVIEWS GENETICS

Comparative transcriptome analysis reveals vertebrate phylotypic period during organogenesis

(2011) Naoki Irie et al.   Nature Communications

Adaptive Evolution of Escherichia coli K-12 MG1655 during Growth on a Nonnative Carbon Source, L-1,2-Propanediol

(2010) D.-H. Lee et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Experimental evolution with E. coli in diverse resource environments. I. Fluctuating environments promote divergence of replicate populations

(2010) Tim F Cooper et al.   BMC EVOLUTIONARY BIOLOGY

Transcriptome analysis of parallel-evolved Escherichia coli strains under ethanol stress

(2010) Takaaki Horinouchi et al.   BMC GENOMICS

Transition from Positive to Neutral in Mutation Fixation along with Continuing Rising Fitness in Thermal Adaptive Evolution

(2010) Toshihiko Kishimoto et al.   PLoS Genetics

Molecular and Evolutionary Bases of Within-Patient Genotypic and Phenotypic Diversity in Escherichia coli Extraintestinal Infections

(2010) Maxime Levert et al.   PLoS Pathogens

Nongenetic Inheritance and Its Evolutionary Implications

(2009) Russell Bonduriansky et al.   Annual Review of Ecology Evolution and Systematics

Genome evolution and adaptation in a long-term experiment with Escherichia coli

(2009) Jeffrey E. Barrick et al.   NATURE

Assessing the Impact of Transgenerational Epigenetic Variation on Complex Traits

(2009) Frank Johannes et al.   PLoS Genetics

Whole-genome resequencing of Escherichia coli K-12 MG1655 undergoing short-term laboratory evolution in lactate minimal media reveals flexible selection of adaptive mutations

(2009) Tom M Conrad et al.   GENOME BIOLOGY

An improved physico-chemical model of hybridization on high-density oligonucleotide microarrays

(2008) N. Ono et al.   BIOINFORMATICS

Model-based analysis of non-specific binding for background correction of high-density oligonucleotide microarrays

(2008) Chikara Furusawa et al.   BIOINFORMATICS

Epigenetic inheritance based evolution of antibiotic resistance in bacteria

(2008) Mike Adam et al.   BMC EVOLUTIONARY BIOLOGY

The global, ppGpp-mediated stringent response to amino acid starvation in Escherichia coli

(2008) Matthew F. Traxler et al.   MOLECULAR MICROBIOLOGY