Functional divergence and adaptive selection of KNOX gene family in plants

Genome-Wide Identification of the MdKNOX Gene Family and Characterization of Its Transcriptional Regulation in Malus domestica

(2020) Peng Jia et al.   Frontiers in Plant Science

The Class II KNOX genes KNAT3 and KNAT7 work cooperatively to influence deposition of secondary cell walls that provide mechanical support to Arabidopsis stems

(2019) Shumin Wang et al.   PLANT JOURNAL

Comparative and Expression Analysis of Ubiquitin Conjugating Domain-Containing Genes in Two Pyrus Species

(2018) Yunpeng Cao et al.   Cells

KNOX Protein OSH15 Induces Grain Shattering by Repressing Lignin Biosynthesis Genes

(2017) Jinmi Yoon et al.   PLANT PHYSIOLOGY

MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets

(2016) Sudhir Kumar et al.   MOLECULAR BIOLOGY AND EVOLUTION

Nonreciprocal complementation of KNOX gene function in land plants

(2016) Eftychios Frangedakis et al.   NEW PHYTOLOGIST

Diverse functions of KNOX transcription factors in the diploid body plan of plants

(2015) Katsutoshi Tsuda et al.   CURRENT OPINION IN PLANT BIOLOGY

The Phyre2 web portal for protein modeling, prediction and analysis

(2015) Lawrence A Kelley et al.   Nature Protocols

The Pfam protein families database: towards a more sustainable future

(2015) Robert D. Finn et al.   NUCLEIC ACIDS RESEARCH

The divergence and positive selection of the plant-specific BURP-containing protein family

(2015) Lihui Wang et al.   Ecology and Evolution

Antagonistic Roles for KNOX1 and KNOX2 Genes in Patterning the Land Plant Body Plan Following an Ancient Gene Duplication

(2015) Chihiro Furumizu et al.   PLoS Genetics

GSDS 2.0: an upgraded gene feature visualization server

(2014) Bo Hu et al.   BIOINFORMATICS

Delineation of plant caleosin residues critical for functional divergence, positive selection and coevolution

(2014) Wanlu Song et al.   BMC EVOLUTIONARY BIOLOGY

SMART: recent updates, new developments and status in 2015

(2014) Ivica Letunic et al.   NUCLEIC ACIDS RESEARCH

BEL1-LIKE HOMEODOMAIN6 and KNOTTED ARABIDOPSIS THALIANA7 Interact and Regulate Secondary Cell Wall Formation via Repression ofREVOLUTA

(2014) Yuanyuan Liu et al.   PLANT CELL

Molecular Evolution and Expansion Analysis of the NAC Transcription Factor in Zea mays

(2014) Kai Fan et al.   PLoS One

The large soybean (Glycine max) WRKY TF family expanded by segmental duplication events and subsequent divergent selection among subgroups

(2013) Guangjun Yin et al.   BMC PLANT BIOLOGY

An Update of DIVERGE Software for Functional Divergence Analysis of Protein Family

(2013) Xun Gu et al.   MOLECULAR BIOLOGY AND EVOLUTION

KNOX2 Genes Regulate the Haploid-to-Diploid Morphological Transition in Land Plants

(2013) K. Sakakibara et al.   SCIENCE

The draft genome of a diploid cotton Gossypium raimondii

(2012) Kunbo Wang et al.   NATURE GENETICS

The Class II KNOX gene KNAT7 negatively regulates secondary wall formation in Arabidopsis and is functionally conserved in Populus

(2012) Eryang Li et al.   NEW PHYTOLOGIST

MrBayes 3.2: Efficient Bayesian Phylogenetic Inference and Model Choice Across a Large Model Space

(2012) Fredrik Ronquist et al.   SYSTEMATIC BIOLOGY

Regulation of Compound Leaf Development inMedicago truncatulabyFused Compound Leaf1,a Class MKNOXGene

(2011) Jianling Peng et al.   PLANT CELL

14-3-3 proteins in plant physiology

(2011) Fiona C. Denison et al.   SEMINARS IN CELL & DEVELOPMENTAL BIOLOGY

Plant development: A TALE story

(2010) Olivier Hamant et al.   COMPTES RENDUS BIOLOGIES

A Comprehensive Classification and Evolutionary Analysis of Plant Homeobox Genes

(2009) K. Mukherjee et al.   MOLECULAR BIOLOGY AND EVOLUTION

Protein structure prediction on the Web: a case study using the Phyre server

(2009) Lawrence A Kelley et al.   Nature Protocols

MEME SUITE: tools for motif discovery and searching

(2009) T. L. Bailey et al.   NUCLEIC ACIDS RESEARCH

Duplicate genes increase expression diversity in closely related species and allopolyploids

(2009) M. Ha et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Early Sexual Origins of Homeoprotein Heterodimerization and Evolution of the Plant KNOX/BELL Family

(2008) Jae-Hyeok Lee et al.   CELL

Unraveling ancient hexaploidy through multiply-aligned angiosperm gene maps

(2008) H. Tang et al.   GENOME RESEARCH

Interaction of KNAT6 and KNAT2 with BREVIPEDICELLUS and PENNYWISE in Arabidopsis Inflorescences

(2008) L. Ragni et al.   PLANT CELL