Downy Mildew effector HaRxL21 interacts with the transcriptional repressor TOPLESS to promote pathogen susceptibility

PBS3 Protects EDS1 from Proteasome-Mediated Degradation in Plant Immunity

(2019) Ming Chang et al.   Molecular Plant

Function of miR825 and miR825* as Negative Regulators in Bacillus cereus AR156-elicited Systemic Resistance to Botrytis cinerea in Arabidopsis thaliana

(2019) Pingping Nie et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Arabidopsis CAMTA Transcription Factors Regulate Pipecolic Acid Biosynthesis and Priming of Immunity Genes

(2019) Yongsig Kim et al.   Molecular Plant

Ca2+/Calmodulin-Dependent AtSR1/CAMTA3 Plays Critical Roles in Balancing Plant Growth and Immunity

(2018) Peiguo Yuan et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Plant cell surface molecular cypher: Receptor-like proteins and their roles in immunity and development

(2018) Pierce A. Jamieson et al.   PLANT SCIENCE

Plants send small RNAs in extracellular vesicles to fungal pathogen to silence virulence genes

(2018) Qiang Cai et al.   SCIENCE

SIZ1-Mediated SUMOylation of TPR1 Suppresses Plant Immunity in Arabidopsis

(2018) De Niu et al.   Molecular Plant

A downy mildew effector evades recognition by polymorphism of expression and subcellular localization

(2018) Shuta Asai et al.   Nature Communications

A dominant-interfering camta3 mutation compromises primary transcriptional outputs mediated by both cell surface and intracellular immune receptors in Arabidopsis thaliana

(2017) Florence Jacob et al.   NEW PHYTOLOGIST

A calmodulin-like protein regulates plasmodesmal closure during bacterial immune responses

(2017) Bo Xu et al.   NEW PHYTOLOGIST

agriGO v2.0: a GO analysis toolkit for the agricultural community, 2017 update

(2017) Tian Tian et al.   NUCLEIC ACIDS RESEARCH

Botrytis cinerea B05.10 promotes disease development in Arabidopsis by suppressing WRKY33-mediated host immunity

(2017) Shouan Liu et al.   PLANT CELL AND ENVIRONMENT

The Arabidopsis Mitochondrial Protease FtSH4 Is Involved in Leaf Senescence via Regulation of WRKY-Dependent Salicylic Acid Accumulation and Signaling

(2017) Shengchun Zhang et al.   PLANT PHYSIOLOGY

Structure of theArabidopsisTOPLESS corepressor provides insight into the evolution of transcriptional repression

(2017) Raquel Martin-Arevalillo et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Plant-Pathogen Effectors: Cellular Probes Interfering with Plant Defenses in Spatial and Temporal Manners

(2016) Tania Y. Toruño et al.   Annual Review of Phytopathology

Transcriptional regulation of receptor-like protein genes by environmental stresses and hormones and their overexpression activities inArabidopsis thaliana

(2016) Jinbin Wu et al.   JOURNAL OF EXPERIMENTAL BOTANY

Erratum: Near-optimal probabilistic RNA-seq quantification

(2016) Nicolas L Bray et al.   NATURE BIOTECHNOLOGY

A High-Resolution Imaging Approach to Investigate Chromatin Architecture in Complex Tissues

(2015) Michael W. Linhoff et al.   CELL

Candidate Effector Proteins of the Rust Pathogen Melampsora larici-populina Target Diverse Plant Cell Compartments

(2015) Benjamin Petre et al.   MOLECULAR PLANT-MICROBE INTERACTIONS

limma powers differential expression analyses for RNA-sequencing and microarray studies

(2015) Matthew E. Ritchie et al.   NUCLEIC ACIDS RESEARCH

Transcriptional Dynamics Driving MAMP-Triggered Immunity and Pathogen Effector-Mediated Immunosuppression in Arabidopsis Leaves Following Infection withPseudomonas syringaepv tomato DC3000

(2015) Laura A. Lewis et al.   PLANT CELL

An RLP23–SOBIR1–BAK1 complex mediates NLP-triggered immunity

(2015) Isabell Albert et al.   Nature Plants

EXPRSS: an Illumina based high-throughput expression-profiling method to reveal transcriptional dynamics

(2014) Ghanasyam Rallapalli et al.   BMC GENOMICS

Convergent Targeting of a Common Host Protein-Network by Pathogen Effectors from Three Kingdoms of Life

(2014) Ralf Weßling et al.   Cell Host & Microbe

Genome-wide identification, phylogenetic analysis, expression profiling, and protein–protein interaction properties of TOPLESS gene family members in tomato

(2014) Yanwei Hao et al.   JOURNAL OF EXPERIMENTAL BOTANY

DNA-binding specificities of plant transcription factors and their potential to define target genes

(2014) José M. Franco-Zorrilla et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The Bacterial Effector HopX1 Targets JAZ Transcriptional Repressors to Activate Jasmonate Signaling and Promote Infection in Arabidopsis

(2014) Selena Gimenez-Ibanez et al.   PLOS BIOLOGY

Expression Profiling during Arabidopsis/Downy Mildew Interaction Reveals a Highly-Expressed Effector That Attenuates Responses to Salicylic Acid

(2014) Shuta Asai et al.   PLoS Pathogens

voom: precision weights unlock linear model analysis tools for RNA-seq read counts

(2014) Charity W Law et al.   GENOME BIOLOGY

RLP1.1, a novel wheat receptor-like protein gene, is involved in the defence response against Puccinia striiformis f. sp. tritici

(2013) Zhengning Jiang et al.   JOURNAL OF EXPERIMENTAL BOTANY

Arabidopsis RECEPTOR-LIKE PROTEIN30 and Receptor-Like Kinase SUPPRESSOR OF BIR1-1/EVERSHED Mediate Innate Immunity to Necrotrophic Fungi

(2013) W. Zhang et al.   PLANT CELL

Jasmonate signalling: a copycat of auxin signalling?

(2013) A. CUÉLLAR PÉREZ et al.   PLANT CELL AND ENVIRONMENT

Arabidopsis thaliana RESISTANCE TO FUSARIUM OXYSPORUM 2 Implicates Tyrosine-Sulfated Peptide Signaling in Susceptibility and Resistance to Root Infection

(2013) Yunping Shen et al.   PLoS Genetics

APETALA2 negatively regulates multiple floral organ identity genes in Arabidopsis by recruiting the co-repressor TOPLESS and the histone deacetylase HDA19

(2012) N. T. Krogan et al.   DEVELOPMENT

EDS1 Contributes to Nonhost Resistance of Arabidopsis thaliana Against Erwinia amylovora

(2012) Manon Moreau et al.   MOLECULAR PLANT-MICROBE INTERACTIONS

A Xanthomonas uridine 5′-monophosphate transferase inhibits plant immune kinases

(2012) Feng Feng et al.   NATURE

Fast gapped-read alignment with Bowtie 2

(2012) Ben Langmead et al.   NATURE METHODS

The Lectin Receptor Kinase-VI.2 Is Required for Priming and Positively Regulates Arabidopsis Pattern-Triggered Immunity

(2012) P. Singh et al.   PLANT CELL

JAZ8 Lacks a Canonical Degron and Has an EAR Motif That Mediates Transcriptional Repression of Jasmonate Responses in Arabidopsis

(2012) C. Shyu et al.   PLANT CELL

Arabidopsis Defense against Botrytis cinerea: Chronology and Regulation Deciphered by High-Resolution Temporal Transcriptomic Analysis

(2012) O. Windram et al.   PLANT CELL

Arabidopsis WRKY33 Is a Key Transcriptional Regulator of Hormonal and Metabolic Responses toward Botrytis cinerea Infection

(2012) R. P. Birkenbihl et al.   PLANT PHYSIOLOGY

Transcriptional corepressor TOPLESS complexes with pseudoresponse regulator proteins and histone deacetylases to regulate circadian transcription

(2012) L. Wang et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Hormone Crosstalk in Plant Disease and Defense: More Than Just JASMONATE-SALICYLATE Antagonism

(2011) Alexandre Robert-Seilaniantz et al.   Annual Review of Phytopathology

A statistical framework for SNP calling, mutation discovery, association mapping and population genetical parameter estimation from sequencing data

(2011) H. Li   BIOINFORMATICS

FIMO: scanning for occurrences of a given motif

(2011) Charles E. Grant et al.   BIOINFORMATICS

WRKY Transcription Factors Involved in Activation of SA Biosynthesis Genes

(2011) Marcel C van Verk et al.   BMC PLANT BIOLOGY

EAR motif-mediated transcriptional repression in plants

(2011) Sateesh Kagale et al.   Epigenetics

Comparative analysis of the XopD type III secretion (T3S) effector family in plant pathogenic bacteria

(2011) JUNG-GUN KIM et al.   MOLECULAR PLANT PATHOLOGY

SignalP 4.0: discriminating signal peptides from transmembrane regions

(2011) Thomas Nordahl Petersen et al.   NATURE METHODS

Structural basis for the assembly of the SMRT/NCoR core transcriptional repression machinery

(2011) Jasmeen Oberoi et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

TheXanthomonasType III Effector XopD Targets theArabidopsisTranscription Factor MYB30 to Suppress Plant Defense

(2011) Joanne Canonne et al.   PLANT CELL

Subcellular localization of the Hpa RxLR effector repertoire identifies a tonoplast-associated protein HaRxL17 that confers enhanced plant susceptibility

(2011) Marie-Cécile Caillaud et al.   PLANT JOURNAL

The TOPLESS Interactome: A Framework for Gene Repression in Arabidopsis

(2011) B. Causier et al.   PLANT PHYSIOLOGY

Arabidopsis WRKY46 coordinates with WRKY70 and WRKY53 in basal resistance against pathogen Pseudomonas syringae

(2011) Yanru Hu et al.   PLANT SCIENCE

iDNA-Prot: Identification of DNA Binding Proteins Using Random Forest with Grey Model

(2011) Wei-Zhong Lin et al.   PLoS One

Evidence for Network Evolution in an Arabidopsis Interactome Map

(2011) et al.   SCIENCE

Independently Evolved Virulence Effectors Converge onto Hubs in a Plant Immune System Network

(2011) M. S. Mukhtar et al.   SCIENCE

Multiple Candidate Effectors from the Oomycete Pathogen Hyaloperonospora arabidopsidis Suppress Host Plant Immunity

(2011) Georgina Fabro et al.   PLoS Pathogens

The Arabidopsis EAR-motif-containing protein RAP2.1 functions as an active transcriptional repressor to keep stress responses under tight control

(2010) Chun-Juan Dong et al.   BMC PLANT BIOLOGY

Natural allelic variation underlying a major fitness trade-off in Arabidopsis thaliana

(2010) Marco Todesco et al.   NATURE

Sugar transporters for intercellular exchange and nutrition of pathogens

(2010) Li-Qing Chen et al.   NATURE

NINJA connects the co-repressor TOPLESS to jasmonate signalling

(2010) Laurens Pauwels et al.   NATURE

Promoter elements of rice susceptibility genes are bound and activated by specific TAL effectors from the bacterial blight pathogen, Xanthomonas oryzae pv. oryzae

(2010) Patrick Römer et al.   NEW PHYTOLOGIST

Genome-Wide Analysis of Ethylene-Responsive Element Binding Factor-Associated Amphiphilic Repression Motif-Containing Transcriptional Regulators in Arabidopsis

(2010) S. Kagale et al.   PLANT PHYSIOLOGY

Arabidopsis resistance protein SNC1 activates immune responses through association with a transcriptional corepressor

(2010) Z. Zhu et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Signatures of Adaptation to Obligate Biotrophy in the Hyaloperonospora arabidopsidis Genome

(2010) L. Baxter et al.   SCIENCE

Conserved Fungal LysM Effector Ecp6 Prevents Chitin-Triggered Immunity in Plants

(2010) R. de Jonge et al.   SCIENCE

A scaling normalization method for differential expression analysis of RNA-seq data

(2010) Mark D Robinson et al.   GENOME BIOLOGY

The Sequence Alignment/Map format and SAMtools

(2009) H. Li et al.   BIOINFORMATICS

Innate Immunity in Plants: An Arms Race Between Pattern Recognition Receptors in Plants and Effectors in Microbial Pathogens

(2009) T. Boller et al.   SCIENCE

Arabidopsis TONNEAU1 Proteins Are Essential for Preprophase Band Formation and Interact with Centrin

(2008) J. Azimzadeh et al.   PLANT CELL

TOPLESS Mediates Auxin-Dependent Transcriptional Repression During Arabidopsis Embryogenesis

(2008) H. Szemenyei et al.   SCIENCE

Groucho/Tup1 family co-repressors in plant development

(2008) Zhongchi Liu et al.   TRENDS IN PLANT SCIENCE