Structural analysis of 70S ribosomes by cross-linking/mass spectrometry reveals conformational plasticity

Proteome-Wide Structural Probing of Low-Abundant Protein Interactions by Cross-Linking Mass Spectrometry

(2020) Julius Fürsch et al.   ANALYTICAL CHEMISTRY

A Simple Cross-Linking/Mass Spectrometry Workflow for Studying System-wide Protein Interactions

(2019) Michael Götze et al.   ANALYTICAL CHEMISTRY

Cross-linking/mass spectrometry to get a closer view on protein interaction networks

(2019) Claudio Iacobucci et al.   CURRENT OPINION IN BIOTECHNOLOGY

Ribosomes and cryo-EM: a duet

(2018) Alan Brown et al.   CURRENT OPINION IN STRUCTURAL BIOLOGY

A Completely Reimplemented MPI Bioinformatics Toolkit with a New HHpred Server at its Core

(2018) Lukas Zimmermann et al.   JOURNAL OF MOLECULAR BIOLOGY

Structural dynamics of protein S1 on the 70S ribosome visualized by ensemble cryo-EM

(2018) Anna B. Loveland et al.   METHODS

The Discovery of Ribosome Heterogeneity and Its Implications for Gene Regulation and Organismal Life

(2018) Naomi R. Genuth et al.   MOLECULAR CELL

Mechanism of tRNA-mediated +1 ribosomal frameshifting

(2018) Samuel Hong et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Structure of a hibernating 100S ribosome reveals an inactive conformation of the ribosomal protein S1

(2018) Bertrand Beckert et al.   Nature Microbiology

Ribosome assembly coming into focus

(2018) Sebastian Klinge et al.   NATURE REVIEWS MOLECULAR CELL BIOLOGY

Folding pathway of an Ig domain is conserved on and off the ribosome

(2018) Pengfei Tian et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Structural Evidence for Product Stabilization by the Ribosomal mRNA Helicase

(2018) Hossein Amiri et al.   RNA

Ribosomal protein L7/L12 is required for GTPase translation factors EF-G, RF3, and IF2 to bind in their GTP state to 70S ribosomes

(2017) Markus A. Carlson et al.   FEBS Journal

Capturing protein communities by structural proteomics in a thermophilic eukaryote

(2017) Panagiotis L Kastritis et al.   Molecular Systems Biology

Architecture of a transcribing-translating expressome

(2017) R. Kohler et al.   SCIENCE

The cryo-EM structure of hibernating 100S ribosome dimer from pathogenic Staphylococcus aureus

(2017) Donna Matzov et al.   Nature Communications

Mechanism of ribosome rescue by ArfA and RF2

(2017) Gabriel Demo et al.   eLife

Structure of RNA polymerase bound to ribosomal 30S subunit

(2017) Gabriel Demo et al.   eLife

Divide and conquer: cleavable cross-linkers to study protein conformation and protein–protein interactions

(2016) Andrea Sinz   ANALYTICAL AND BIOANALYTICAL CHEMISTRY

The Importance of Non-accessible Crosslinks and Solvent Accessible Surface Distance in Modeling Proteins with Restraints From Crosslinking Mass Spectrometry

(2016) Joshua Matthew Allen Bullock et al.   MOLECULAR & CELLULAR PROTEOMICS

Structures of the orthosomycin antibiotics avilamycin and evernimicin in complex with the bacterial 70S ribosome

(2016) Stefan Arenz et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

A Transporter Motor Taken Apart: Flexibility in the Nucleotide Binding Domains of a Heterodimeric ABC Exporter

(2015) Magdalena A. Bukowska et al.   BIOCHEMISTRY

Proteome-wide profiling of protein assemblies by cross-linking mass spectrometry

(2015) Fan Liu et al.   NATURE METHODS

A Newin VivoCross-linking Mass Spectrometry Platform to Define Protein–Protein Interactions in Living Cells

(2014) Robyn M. Kaake et al.   MOLECULAR & CELLULAR PROTEOMICS

Structural basis for the inhibition of the eukaryotic ribosome

(2014) Nicolas Garreau de Loubresse et al.   NATURE

Molecular insights into replication initiation by Qβ replicase using ribosomal protein S1

(2014) Daijiro Takeshita et al.   NUCLEIC ACIDS RESEARCH

Control of Ribosomal Subunit Rotation by Elongation Factor G

(2013) A. Pulk et al.   SCIENCE

Escherichia coli Ribosomal Protein S1 Unfolds Structured mRNAs Onto the Ribosome for Active Translation Initiation

(2013) Mélodie Duval et al.   PLOS BIOLOGY

Ribosome structures to near-atomic resolution from thirty thousand cryo-EM particles

(2013) Xiao-chen Bai et al.   eLife

Xwalk: computing and visualizing distances in cross-linking experiments

(2011) Abdullah Kahraman et al.   BIOINFORMATICS

Bacterial ribosome requires multiple L12 dimers for efficient initiation and elongation of protein synthesis involving IF2 and EF-G

(2011) C. S. Mandava et al.   NUCLEIC ACIDS RESEARCH

Crystal structure of release factor RF3 trapped in the GTP state on a rotated conformation of the ribosome

(2011) J. Zhou et al.   RNA

Cleavable Cross-Linker for Protein Structure Analysis: Reliable Identification of Cross-Linking Products by Tandem MS

(2010) Mathias Q. Müller et al.   ANALYTICAL CHEMISTRY

The Role of L1 Stalk–tRNA Interaction in the Ribosome Elongation Cycle

(2010) Leonardo G. Trabuco et al.   JOURNAL OF MOLECULAR BIOLOGY

The Native 3D Organization of Bacterial Polysomes

(2009) Florian Brandt et al.   CELL

Probing the relationship between Gram-negative and Gram-positive S1 proteins by sequence analysis

(2009) Philippe Salah et al.   NUCLEIC ACIDS RESEARCH

Three-dimensional structure of the two peptides that constitute the two-peptide bacteriocin lactococcin G

(2008) Per Rogne et al.   BIOCHIMICA ET BIOPHYSICA ACTA-PROTEINS AND PROTEOMICS

Molecular mechanism and structure of Trigger Factor bound to the translating ribosome

(2008) Frieder Merz et al.   EMBO JOURNAL