The role of root community attributes in predicting soil fungal and bacterial community patterns

Tales from the underground: soil heterogeneity and not only aboveground plant interactions explain fine‐scale species patterns in a Mediterranean dwarf‐shrubland

(2020) David S. Pescador et al.   JOURNAL OF VEGETATION SCIENCE

Evidence of functional species sorting by rainfall and biotic interactions: A community monolith experimental approach

(2019) Ana L. Peralta et al.   JOURNAL OF ECOLOGY

The Soil Microbiome of GLORIA Mountain Summits in the Swiss Alps

(2019) Magdalene Adamczyk et al.   Frontiers in Microbiology

Estimating belowground plant abundance with DNA metabarcoding

(2019) Silvia Matesanz et al.   Molecular Ecology Resources

Mechanisms and ecological implications of the movement of bacteria in soil

(2018) Pu Yang et al.   APPLIED SOIL ECOLOGY

Predicting the structure of soil communities from plant community taxonomy, phylogeny, and traits

(2018) Jonathan W. Leff et al.   ISME Journal

Plant attributes explain the distribution of soil microbial communities in two contrasting regions of the globe

(2018) Manuel Delgado-Baquerizo et al.   NEW PHYTOLOGIST

Determinants of high mountain plant diversity in the Chilean Andes: From regional to local spatial scales

(2018) Jesús López-Angulo et al.   PLoS One

Belowground plant parts are crucial for comprehensively estimating total plant richness in herbaceous and woody habitats

(2018) Sabrina Träger et al.   ECOLOGY

Tree species identity surpasses richness in affecting soil microbial richness and community composition in subtropical forests

(2018) Liang Chen et al.   SOIL BIOLOGY & BIOCHEMISTRY

Stochastic Community Assembly: Does It Matter in Microbial Ecology?

(2017) Jizhong Zhou et al.   MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS

Root biomass and exudates link plant diversity with soil bacterial and fungal biomass

(2017) Nico Eisenhauer et al.   Scientific Reports

Plant diversity and root traits benefit physical properties key to soil function in grasslands

(2016) Iain J. Gould et al.   ECOLOGY LETTERS

Effects of spatial plant-soil feedback heterogeneity on plant performance in monocultures

(2016) E. R. Jasper Wubs et al.   JOURNAL OF ECOLOGY

Opposing phylogenetic diversity gradients of plant and soil bacterial communities

(2016) Marta Goberna et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

VSEARCH: a versatile open source tool for metagenomics

(2016) Torbjørn Rognes et al.   PeerJ

Relating belowground microbial composition to the taxonomic, phylogenetic, and functional trait distributions of trees in a tropical forest

(2015) Albert Barberán et al.   ECOLOGY LETTERS

Beyond the classical nurse species effect: diversity assembly in a Mediterranean semi-arid dwarf shrubland

(2015) Julia Chacón-Labella et al.   JOURNAL OF VEGETATION SCIENCE

Consistent responses of soil microbial communities to elevated nutrient inputs in grasslands across the globe

(2015) Jonathan W. Leff et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Soil characteristics determine soil carbon and nitrogen availability during leaf litter decomposition regardless of litter quality

(2015) Manuel Delgado-Baquerizo et al.   SOIL BIOLOGY & BIOCHEMISTRY

Soil microbial community variation correlates most strongly with plant species identity, followed by soil chemistry, spatial location and plant genus

(2015) J. H. Burns et al.   AoB Plants

Estimating and mapping ecological processes influencing microbial community assembly

(2015) James C. Stegen et al.   Frontiers in Microbiology

Contribution of above- and below-ground plant traits to the structure and function of grassland soil microbial communities

(2014) N. Legay et al.   ANNALS OF BOTANY

Plant life on gypsum: a review of its multiple facets

(2014) Adrián Escudero et al.   BIOLOGICAL REVIEWS

Plant diversity predicts beta but not alpha diversity of soil microbes across grasslands worldwide

(2014) Suzanne M. Prober et al.   ECOLOGY LETTERS

Does host plant richness explain diversity of ectomycorrhizal fungi? Re-evaluation of Gaoet al. (2013) data sets reveals sampling effects

(2014) Leho Tedersoo et al.   MOLECULAR ECOLOGY

Belowground biodiversity and ecosystem functioning

(2014) Richard D. Bardgett et al.   NATURE

Global drivers and patterns of microbial abundance in soil

(2013) Hector M. Serna-Chavez et al.   GLOBAL ECOLOGY AND BIOGEOGRAPHY

Going back to the roots: the microbial ecology of the rhizosphere

(2013) Laurent Philippot et al.   NATURE REVIEWS MICROBIOLOGY

Phylogenetic relationships among host plants explain differences in fungal species richness and community composition in ectomycorrhizal symbiosis

(2013) Leho Tedersoo et al.   NEW PHYTOLOGIST

Reconstructing the Microbial Diversity and Function of Pre-Agricultural Tallgrass Prairie Soils in the United States

(2013) N. Fierer et al.   SCIENCE

Functional diversity and resource partitioning in fungi associated with the fine feeder roots of forest trees

(2013) Gavin Kernaghan   SYMBIOSIS

Abiotic drivers and plant traits explain landscape-scale patterns in soil microbial communities

(2012) Franciska T. de Vries et al.   ECOLOGY LETTERS

Stochastic and deterministic assembly processes in subsurface microbial communities

(2012) James C Stegen et al.   ISME Journal

UCHIME improves sensitivity and speed of chimera detection

(2011) Robert C. Edgar et al.   BIOINFORMATICS

FLASH: fast length adjustment of short reads to improve genome assemblies

(2011) T. Magoc et al.   BIOINFORMATICS

Variation partitioning involving orthogonal spatial eigenfunction submodels

(2011) Pierre Legendre et al.   ECOLOGY

Effects of selected root exudate components on soil bacterial communities

(2011) Shengjing Shi et al.   FEMS MICROBIOLOGY ECOLOGY

Plant species richness belowground: higher richness and new patterns revealed by next-generation sequencing

(2011) INGA HIIESALU et al.   MOLECULAR ECOLOGY

The Roots of Diversity: Below Ground Species Richness and Rooting Distributions in a Tropical Forest Revealed by DNA Barcodes and Inverse Modeling

(2011) F. Andrew Jones et al.   PLoS One

Plant diversity effects on soil microorganisms support the singular hypothesis

(2010) N. Eisenhauer et al.   ECOLOGY

Soil bacterial and fungal communities across a pH gradient in an arable soil

(2010) Johannes Rousk et al.   ISME Journal

Linkages of plant traits to soil properties and the functioning of temperate grassland

(2010) Kate H. Orwin et al.   JOURNAL OF ECOLOGY

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

Habitat preferences as related to the prolonged dormancy of perennial herbs and ferns

(2010) Margit Reintal et al.   PLANT ECOLOGY

Pyrosequencing reveals a contrasted bacterial diversity between oak rhizosphere and surrounding soil

(2010) Stéphane Uroz et al.   Environmental Microbiology Reports

Pyrosequencing-Based Assessment of Soil pH as a Predictor of Soil Bacterial Community Structure at the Continental Scale

(2009) C. L. Lauber et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Shrub encroachment can reverse desertification in semi-arid Mediterranean grasslands

(2009) Fernando T. Maestre et al.   ECOLOGY LETTERS

Plant species and soil type cooperatively shape the structure and function of microbial communities in the rhizosphere

(2009) Gabriele Berg et al.   FEMS MICROBIOLOGY ECOLOGY

Does grassland vegetation drive soil microbial diversity?

(2009) P. Millard et al.   NUTRIENT CYCLING IN AGROECOSYSTEMS

Carbon flow in the rhizosphere: carbon trading at the soil–root interface

(2009) D. L. Jones et al.   PLANT AND SOIL

Regulation and function of root exudates

(2009) DAYAKAR V. BADRI et al.   PLANT CELL AND ENVIRONMENT

A protocol for data exploration to avoid common statistical problems

(2009) Alain F. Zuur et al.   Methods in Ecology and Evolution

FORWARD SELECTION OF EXPLANATORY VARIABLES

(2008) F. Guillaume Blanchet et al.   ECOLOGY

The unseen majority: soil microbes as drivers of plant diversity and productivity in terrestrial ecosystems

(2008) Marcel G. A. van der Heijden et al.   ECOLOGY LETTERS

Plant host habitat and root exudates shape soil bacterial community structure

(2008) Feth el Zahar Haichar et al.   ISME Journal

Root-Microbe Communication through Protein Secretion

(2008) Clelia De-la-Peña et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Litter type, but not plant cover, regulates initial litter decomposition and fungal community structure in a recolonising cutover peatland

(2008) Clare J. Trinder et al.   SOIL BIOLOGY & BIOCHEMISTRY