Effect of novel leukemia mutations (K75E & E222K) on interferon regulatory factor 1 and its interaction with DNA: insights from molecular dynamics simulations and docking studies

Prioritization of SNPs in y+LAT-1 culpable of Lysinuric protein intolerance and their mutational impacts using protein-protein docking and molecular dynamics simulation studies

(2019) Chandrasekhar Gopalakrishnan et al.   JOURNAL OF CELLULAR BIOCHEMISTRY

An extensive computational approach to analyze and characterize the functional mutations in the galactose-1-phosphate uridyl transferase (GALT) protein responsible for classical galactosemia

(2019) Udhaya Kumar S et al.   COMPUTERS IN BIOLOGY AND MEDICINE

Identification of potential inhibitors against pathogenic missense mutations of PMM2 using a structure-based virtual screening approach

(2019) D. Thirumal Kumar et al.   JOURNAL OF BIOMOLECULAR STRUCTURE & DYNAMICS

The HADDOCK2.2 Web Server: User-Friendly Integrative Modeling of Biomolecular Complexes

(2016) G.C.P. van Zundert et al.   JOURNAL OF MOLECULAR BIOLOGY

A Comprehensive In Silico Analysis on the Structural and Functional Impact of SNPs in the Congenital Heart Defects Associated with NKX2-5 Gene—A Molecular Dynamic Simulation Approach

(2016) Firoz Abdul Samad et al.   PLoS One

Structure and Function of p53-DNA Complexes with Inactivation and Rescue Mutations: A Molecular Dynamics Simulation Study

(2015) Balu Kamaraj et al.   PLoS One

Unfolding stabilities of two structurally similar proteins as probed by temperature-induced and force-induced molecular dynamics simulations

(2014) Biswajit Gorai et al.   JOURNAL OF BIOMOLECULAR STRUCTURE & DYNAMICS

UniProt: a hub for protein information

(2014)   NUCLEIC ACIDS RESEARCH

Flexibility of the Bacterial Chaperone Trigger Factor in Microsecond-Timescale Molecular Dynamics Simulations

(2013) Andrew S. Thomas et al.   BIOPHYSICAL JOURNAL

Investigation of Binding Phenomenon of NSP3 and p130Cas Mutants and Their Effect on Cell Signalling

(2013) Balu K. et al.   CELL BIOCHEMISTRY AND BIOPHYSICS

Mixed Monte Carlo/Molecular Dynamics simulations of the prion protein

(2013) Andre A.S.T. Ribeiro et al.   JOURNAL OF MOLECULAR GRAPHICS & MODELLING

Estimations of the increasing prevalence and plateau prevalence of chronic myeloid leukemia in the era of tyrosine kinase inhibitor therapy

(2012) Xuelin Huang et al.   CANCER

Function and mechanism by which interferon regulatory factor-1 inhibits oncogenesis

(2012) FEI-FEI CHEN et al.   Oncology Letters

Changes in Lysozyme Flexibility upon Mutation Are Frequent, Large and Long-Ranged

(2012) Deeptak Verma et al.   PLoS Computational Biology

The IRF family of transcription factors

(2012) Hideyuki Yanai et al.   OncoImmunology

CPORT: A Consensus Interface Predictor and Its Performance in Prediction-Driven Docking with HADDOCK

(2011) Sjoerd J. de Vries et al.   PLoS One

3D-DART: a DNA structure modelling server

(2009) M. van Dijk et al.   NUCLEIC ACIDS RESEARCH

I-TASSER server for protein 3D structure prediction

(2008) Yang Zhang   BMC BIOINFORMATICS