Fine capsule variation affects bacteriophage susceptibility in Klebsiella pneumoniae ST258

Host adaptation and convergent evolution increases antibiotic resistance without loss of virulence in a major human pathogen

(2019) Alicia Fajardo-Lubián et al.   PLoS Pathogens

New Bacteriophages against Emerging Lineages ST23 and ST258 of Klebsiella pneumoniae and Efficacy Assessment in Galleria mellonella Larvae

(2019) Damien Thiry et al.   Viruses-Basel

Absence of the glycosyltransferase WcaJ in Klebsiella pneumoniae ATCC13883 affects biofilm formation, increases polymyxin resistance and reduces murine macrophage activation

(2019) Shilpa Pal et al.   MICROBIOLOGY-SGM

Translating genomics into practice for real-time surveillance and response to carbapenemase-producing Enterobacteriaceae: evidence from a complex multi-institutional KPC outbreak

(2018) Jason C. Kwong et al.   PeerJ

Targeting mechanisms of tailed bacteriophages

(2018) Franklin L. Nobrega et al.   NATURE REVIEWS MICROBIOLOGY

Characterization of vB_Kpn_F48, a Newly Discovered Lytic Bacteriophage for Klebsiella pneumoniae of Sequence Type 101

(2018) Nagaia Ciacci et al.   Viruses-Basel

The Capsule Regulatory Network of Klebsiella pneumoniae Defined by density-TraDISort

(2018) Matthew J. Dorman et al.   mBio

Phage-Borne Depolymerases Decrease Klebsiella pneumoniae Resistance to Innate Defense Mechanisms

(2018) Grazyna Majkowska-Skrobek et al.   Frontiers in Microbiology

Bacteriophage-encoded depolymerases: their diversity and biotechnological applications

(2016) Diana P. Pires et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

blaCTX-M-15 carried by IncF-type plasmids is the dominant ESBL gene in Escherichia coli and Klebsiella pneumoniae at a hospital in Ghana

(2016) Alex Agyekum et al.   DIAGNOSTIC MICROBIOLOGY AND INFECTIOUS DISEASE

PHASTER: a better, faster version of the PHAST phage search tool

(2016) David Arndt et al.   NUCLEIC ACIDS RESEARCH

Identification of a capsular variant and characterization of capsular acetylation in Klebsiella pneumoniae PLA-associated type K57

(2016) Chun-Ru Hsu et al.   Scientific Reports

A Bacterial Analysis Platform: An Integrated System for Analysing Bacterial Whole Genome Sequencing Data for Clinical Diagnostics and Surveillance

(2016) Martin Christen Frølund Thomsen et al.   PLoS One

Carbapenemase-Producing Klebsiella pneumoniae, a Key Pathogen Set for Global Nosocomial Dominance

(2015) Johann D. D. Pitout et al.   ANTIMICROBIAL AGENTS AND CHEMOTHERAPY

Roary: rapid large-scale prokaryote pan genome analysis

(2015) Andrew J. Page et al.   BIOINFORMATICS

Extensive Capsule Locus Variation and Large-Scale Genomic Recombination within the Klebsiella pneumoniae Clonal Group 258

(2015) Kelly L. Wyres et al.   Genome Biology and Evolution

Emergence of blaKPC carbapenemase genes in Australia

(2015) Sally R. Partridge et al.   INTERNATIONAL JOURNAL OF ANTIMICROBIAL AGENTS

The phage tail tape measure protein, an inner membrane protein and a periplasmic chaperone play connected roles in the genome injection process ofE. coliphage HK97

(2015) Nichole Cumby et al.   MOLECULAR MICROBIOLOGY

Genomic analysis of diversity, population structure, virulence, and antimicrobial resistance inKlebsiella pneumoniae, an urgent threat to public health

(2015) Kathryn E. Holt et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Integration of genomic and proteomic analyses in the classification of the Siphoviridae family

(2015) Evelien M. Adriaenssens et al.   VIROLOGY

Genetic analysis of capsular polysaccharide synthesis gene clusters in 79 capsular types of Klebsiella spp

(2015) Yi-Jiun Pan et al.   Scientific Reports

In Silico Analysis of Usher Encoding Genes in Klebsiella pneumoniae and Characterization of Their Role in Adhesion and Colonization

(2015) Fida Khater et al.   PLoS One

RASTtk: A modular and extensible implementation of the RAST algorithm for building custom annotation pipelines and annotating batches of genomes

(2015) Thomas Brettin et al.   Scientific Reports

RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies

(2014) Alexandros Stamatakis   BIOINFORMATICS

Rapid phylogenetic analysis of large samples of recombinant bacterial whole genome sequences using Gubbins

(2014) Nicholas J. Croucher et al.   NUCLEIC ACIDS RESEARCH

Molecular dissection of the evolution of carbapenem-resistant multilocus sequence type 258Klebsiella pneumoniae

(2014) Frank R. DeLeo et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The factors affecting effectiveness of treatment in phages therapy

(2014) Mai Huong Ly-Chatain   Frontiers in Microbiology

Characterization of multidrug-resistant Klebsiella pneumoniae from Australia carrying blaNDM-1

(2013) Shereen Shoma et al.   DIAGNOSTIC MICROBIOLOGY AND INFECTIOUS DISEASE

Phage cocktails and the future of phage therapy

(2013) Benjamin K Chan et al.   Future Microbiology

Isolation of a Bacteriophage Specific for a New Capsular Type of Klebsiella pneumoniae and Characterization of Its Polysaccharide Depolymerase

(2013) Chun-Ru Hsu et al.   PLoS One

Characterising the biology of novel lytic bacteriophages infecting multidrug resistant Klebsiella pneumoniae

(2013) Agata Kęsik-Szeloch et al.   Virology Journal

Multi-functional analysis ofKlebsiella pneumoniaefimbrial types in adherence and biofilm formation

(2013) María D. Alcántar-Curiel et al.   Virulence

SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing

(2012) Anton Bankevich et al.   JOURNAL OF COMPUTATIONAL BIOLOGY

Easyfig: a genome comparison visualizer

(2011) M. J. Sullivan et al.   BIOINFORMATICS

Replicon sequence typing of IncF plasmids carrying virulence and resistance determinants

(2010) Laura Villa et al.   JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY

A Membrane-located Glycosyltransferase Complex Required for Biosynthesis of the d-Galactan I Lipopolysaccharide O Antigen inKlebsiella pneumoniae

(2010) Veronica Kos et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

The real threat of Klebsiella pneumoniae carbapenemase-producing bacteria

(2009) Patrice Nordmann et al.   LANCET INFECTIOUS DISEASES

Architectures and biogenesis of non-flagellar protein appendages in Gram-negative bacteria

(2008) Remi Fronzes et al.   EMBO JOURNAL