Genome-wide identification and comparison of differentially expressed profiles of miRNAs and lncRNAs with associated ceRNA networks in the gonads of Chinese soft-shelled turtle, Pelodiscus sinensis

A novel, noncoding-RNA-mediated, post-transcriptional mechanism of anti-Mullerian hormone regulation by the H19/let-7 axis

(2019) Chunrong Qin et al.   BIOLOGY OF REPRODUCTION

Comprehensive analysis of long noncoding RNA and mRNA expression patterns in sheep testicular maturation†

(2018) Hua Yang et al.   BIOLOGY OF REPRODUCTION

A 5′ UTR-Overlapping LncRNA Activates the Male-Determining Gene doublesex1 in the Crustacean Daphnia magna

(2018) Yasuhiko Kato et al.   CURRENT BIOLOGY

Comparative mRNA and miRNA expression in European mouflon (Ovis musimon) and sheep (Ovis aries) provides novel insights into the genetic mechanisms for female reproductive success

(2018) Ji Yang et al.   HEREDITY

lncRNAs in Plant and Animal Sexual Reproduction

(2018) Agnieszka A. Golicz et al.   TRENDS IN PLANT SCIENCE

Screening and characterisation of sex differentiation-related long non-coding RNAs in Chinese soft-shell turtle (Pelodiscus sinensis)

(2018) Jun Zhang et al.   Scientific Reports

Crosstalk among lncRNAs, microRNAs and mRNAs in the muscle ‘degradome’ of rainbow trout

(2018) Bam Paneru et al.   Scientific Reports

Long non-coding RNAs potentially function synergistically in the cellular reprogramming of SCNT embryos

(2018) Fengrui Wu et al.   BMC GENOMICS

Knockdown of Long Non-Coding RNA GAS5 Increases miR-23a by Targeting ATG3 Involved in Autophagy and Cell Viability

(2018) Lexing Li et al.   CELLULAR PHYSIOLOGY AND BIOCHEMISTRY

Genome-Wide Analysis of Prognostic lncRNAs, miRNAs, and mRNAs Forming a Competing Endogenous RNA Network in Hepatocellular Carcinoma

(2018) Peng Lin et al.   CELLULAR PHYSIOLOGY AND BIOCHEMISTRY

H19 regulates the proliferation of bovine male germline stem cells via IGF-1 signaling pathway

(2018) Qijing Lei et al.   JOURNAL OF CELLULAR PHYSIOLOGY

MicroRNA-130a inhibits spermatogenesis by directly targeting androgen receptor in mouse Sertoli cells

(2018) Cailing Li et al.   MOLECULAR REPRODUCTION AND DEVELOPMENT

miR-202-3p Regulates Sertoli Cell Proliferation, Synthesis Function, and Apoptosis by Targeting LRP6 and Cyclin D1 of Wnt/β-Catenin Signaling

(2018) Chao Yang et al.   Molecular Therapy-Nucleic Acids

Transcription of CYP19A1 is directly regulated by SF-1 in the theca cells of ovary follicles in chicken

(2017) Jing Wang et al.   GENERAL AND COMPARATIVE ENDOCRINOLOGY

Mrhl Long Noncoding RNA Mediates Meiotic Commitment of Mouse Spermatogonial Cells by Regulating Sox8 Expression

(2017) Shubhangini Kataruka et al.   MOLECULAR AND CELLULAR BIOLOGY

MicroRNA-130b is involved in bovine granulosa and cumulus cells function, oocyte maturation and blastocyst formation

(2017) Pritam Bala Sinha et al.   Journal of Ovarian Research

MicroRNAs: tiny molecules with a significant role in mammalian follicular and oocyte development

(2017) Dawit Tesfaye et al.   REPRODUCTION

Wt1directs the lineage specification of sertoli and granulosa cells by repressingSf1expression

(2016) Min Chen et al.   DEVELOPMENT

Foxl3, a Target of miR-9, Stimulates Spermatogenesis in Spermatogonia During Natural Sex Change in Monopterus albus

(2016) Yu Gao et al.   ENDOCRINOLOGY

Critical roles of long noncoding RNAs inDrosophilaspermatogenesis

(2016) Kejia Wen et al.   GENOME RESEARCH

MicroRNA-224 regulates self-renewal of mouse spermatogonial stem cellsviatargeting DMRT1

(2016) Na Cui et al.   JOURNAL OF CELLULAR AND MOLECULAR MEDICINE

CREB activity is required for luteinizing hormone-induced the expression of EGF-like factors

(2016) Yakun Wang et al.   MOLECULAR REPRODUCTION AND DEVELOPMENT

Transcript-level expression analysis of RNA-seq experiments with HISAT, StringTie and Ballgown

(2016) Mihaela Pertea et al.   Nature Protocols

Expression dynamics, relationships, and transcriptional regulations of diverse transcripts in mouse spermatogenic cells

(2016) Xiwen Lin et al.   RNA Biology

Global analysis of differential gene expression related to long-term sperm storage in oviduct of Chinese Soft-Shelled Turtle Pelodiscus sinensis

(2016) Tengfei Liu et al.   Scientific Reports

MicroRNA-378 regulates oocyte maturation via the suppression of aromatase in porcine cumulus cells

(2015) Bo Pan et al.   AMERICAN JOURNAL OF PHYSIOLOGY-ENDOCRINOLOGY AND METABOLISM

Wnt Signaling in Sexual Dimorphism

(2015) G. Deshpande et al.   GENETICS

Long non-coding RNA regulation of reproduction and development

(2015) David H. Taylor et al.   MOLECULAR REPRODUCTION AND DEVELOPMENT

StringTie enables improved reconstruction of a transcriptome from RNA-seq reads

(2015) Mihaela Pertea et al.   NATURE BIOTECHNOLOGY

HISAT: a fast spliced aligner with low memory requirements

(2015) Daehwan Kim et al.   NATURE METHODS

Control of Chromatin Structure by Long Noncoding RNA

(2015) Gudrun Böhmdorfer et al.   TRENDS IN CELL BIOLOGY

Genome wide chromatin occupancy ofmrhlRNA and its role in gene regulation in mouse spermatogonial cells

(2015) Vijay Suresh Akhade et al.   RNA Biology

LncTar: a tool for predicting the RNA targets of long noncoding RNAs

(2014) Jianwei Li et al.   BRIEFINGS IN BIOINFORMATICS

Differential expression analysis of Paralichthys olivaceus microRNAs in adult ovary and testis by deep sequencing

(2014) Yifeng Gu et al.   GENERAL AND COMPARATIVE ENDOCRINOLOGY

A Genome-Wide Survey of Sexually Dimorphic Expression of Drosophila miRNAs Identifies the Steroid Hormone-Induced miRNA let-7 as a Regulator of Sexual Identity

(2014) D. Fagegaltier et al.   GENETICS

The evolution of lncRNA repertoires and expression patterns in tetrapods

(2014) Anamaria Necsulea et al.   NATURE

Regulation of spermatogenesis by small non-coding RNAs: Role of the germ granule

(2014) Sara de Mateo et al.   SEMINARS IN CELL & DEVELOPMENTAL BIOLOGY

A meta-analysis of the genomic and transcriptomic composition of complex life

(2013) Gangiang Liu et al.   CELL CYCLE

miRBase: annotating high confidence microRNAs using deep sequencing data

(2013) Ana Kozomara et al.   NUCLEIC ACIDS RESEARCH

MiRNA-20 and mirna-106a regulate spermatogonial stem cell renewal at the post-transcriptional level via targeting STAT3 and Ccnd1

(2013) Zuping He et al.   STEM CELLS

miRNA_Targets: A database for miRNA target predictions in coding and non-coding regions of mRNAs

(2012) Amit Kumar et al.   GENOMICS

mrhl RNA, a Long Noncoding RNA, Negatively Regulates Wnt Signaling through Its Protein Partner Ddx5/p68 in Mouse Spermatogonial Cells

(2012) G. Arun et al.   MOLECULAR AND CELLULAR BIOLOGY

Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks

(2012) Cole Trapnell et al.   Nature Protocols

A ceRNA Hypothesis: The Rosetta Stone of a Hidden RNA Language?

(2011) Leonardo Salmena et al.   CELL

miRNA and mammalian male germ cells

(2011) S.C. McIver et al.   HUMAN REPRODUCTION UPDATE

Non-coding RNAs in human disease

(2011) Manel Esteller   NATURE REVIEWS GENETICS

miRDeep2 accurately identifies known and hundreds of novel microRNA genes in seven animal clades

(2011) Marc R. Friedländer et al.   NUCLEIC ACIDS RESEARCH

MicroRNA signature in testes-derived male germ-line stem cells

(2010) Yoon Hee Jung et al.   MOLECULAR HUMAN REPRODUCTION

DEGseq: an R package for identifying differentially expressed genes from RNA-seq data

(2009) Likun Wang et al.   BIOINFORMATICS

A Randomly Integrated Transgenic H19 Imprinting Control Region Acquires Methylation Imprinting Independently of Its Establishment in Germ Cells

(2009) H. Matsuzaki et al.   MOLECULAR AND CELLULAR BIOLOGY

Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

(2009) Ben Langmead et al.   GENOME BIOLOGY

MicroRNA Biogenesis Is Required for Mouse Primordial Germ Cell Development and Spermatogenesis

(2008) Katsuhiko Hayashi et al.   PLoS One