Impact of plants on the diversity and activity of methylotrophs in soil
Published 2020 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
Impact of plants on the diversity and activity of methylotrophs in soil
Authors
Keywords
-
Journal
Microbiome
Volume 8, Issue 1, Pages -
Publisher
Springer Science and Business Media LLC
Online
2020-03-11
DOI
10.1186/s40168-020-00801-4
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- Genome-Resolved Proteomic Stable Isotope Probing of Soil Microbial Communities Using 13CO2 and 13C-Methanol
- (2019) Zhou Li et al. Frontiers in Microbiology
- Genetic Analysis of Human Norovirus Strains in Japan in 2016–2017
- (2018) Koo Nagasawa et al. Frontiers in Microbiology
- Microbial Interkingdom Interactions in Roots Promote Arabidopsis Survival
- (2018) Paloma Durán et al. CELL
- Culturable Facultative Methylotrophic Bacteria from the Cactus Neobuxbaumia macrocephala Possess the Locus xoxF and Consume Methanol in the Presence of Ce3+ and Ca2+
- (2017) María del Rocío Bustillos-Cristales et al. MICROBES AND ENVIRONMENTS
- A novel Delftia plant symbiont capable of autotrophic methylotrophy
- (2017) N. V. Agafonova et al. MICROBIOLOGY
- Minimum information about a single amplified genome (MISAG) and a metagenome-assembled genome (MIMAG) of bacteria and archaea
- (2017) Robert M Bowers et al. NATURE BIOTECHNOLOGY
- Acidotolerant Bacteria and Fungi as a Sink of Methanol-Derived Carbon in a Deciduous Forest Soil
- (2017) Mareen Morawe et al. Frontiers in Microbiology
- MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets
- (2016) Sudhir Kumar et al. MOLECULAR BIOLOGY AND EVOLUTION
- Resilient microorganisms in dust samples of the International Space Station—survival of the adaptation specialists
- (2016) Maximilian Mora et al. Microbiome
- Different Bacterial Populations Associated with the Roots and Rhizosphere of Rice Incorporate Plant-Derived Carbon
- (2015) Marcela Hernández et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- MEGAHIT: an ultra-fast single-node solution for large and complex metagenomics assembly via succinct de Bruijn graph
- (2015) Dinghua Li et al. BIOINFORMATICS
- XoxFencoding an alternative methanol dehydrogenase is widespread in coastal marine environments
- (2015) Martin Taubert et al. ENVIRONMENTAL MICROBIOLOGY
- CheckM: assessing the quality of microbial genomes recovered from isolates, single cells, and metagenomes
- (2015) Donovan H. Parks et al. GENOME RESEARCH
- Metagenomic Analysis of the Bacterial Community Associated with the Taproot of Sugar Beet
- (2015) Hirohito Tsurumaru et al. MICROBES AND ENVIRONMENTS
- MetaBAT, an efficient tool for accurately reconstructing single genomes from complex microbial communities
- (2015) Dongwan D. Kang et al. PeerJ
- PQQ-dependent methanol dehydrogenases: rare-earth elements make a difference
- (2014) Jan T. Keltjens et al. APPLIED MICROBIOLOGY AND BIOTECHNOLOGY
- Trimmomatic: a flexible trimmer for Illumina sequence data
- (2014) Anthony M. Bolger et al. BIOINFORMATICS
- Spatial distribution analyses of natural phyllosphere-colonizing bacteria onArabidopsis thalianarevealed by fluorescencein situhybridization
- (2014) Mitja N. P. Remus-Emsermann et al. ENVIRONMENTAL MICROBIOLOGY
- An environmental bacterial taxon with a large and distinct metabolic repertoire
- (2014) Micheal C. Wilson et al. NATURE
- QUAST: quality assessment tool for genome assemblies
- (2013) Alexey Gurevich et al. BIOINFORMATICS
- Comparative metatranscriptomics reveals kingdom level changes in the rhizosphere microbiome of plants
- (2013) Thomas R Turner et al. ISME Journal
- Rhizosphere microbiome assemblage is affected by plant development
- (2013) Jacqueline M Chaparro et al. ISME Journal
- Metabolic characteristics of the species Variovorax paradoxus
- (2012) Barbara Satola et al. APPLIED MICROBIOLOGY AND BIOTECHNOLOGY
- Methanol oxidation by temperate soils and environmental determinants of associated methylotrophs
- (2012) Astrid Stacheter et al. ISME Journal
- Defining the core Arabidopsis thaliana root microbiome
- (2012) Derek S. Lundberg et al. NATURE
- Metagenomic microbial community profiling using unique clade-specific marker genes
- (2012) Nicola Segata et al. NATURE METHODS
- UCHIME improves sensitivity and speed of chimera detection
- (2011) Robert C. Edgar et al. BIOINFORMATICS
- Modularity of methylotrophy, revisited
- (2011) Ludmila Chistoserdova ENVIRONMENTAL MICROBIOLOGY
- Metaproteogenomic analysis of microbial communities in the phyllosphere and rhizosphere of rice
- (2011) Claudia Knief et al. ISME Journal
- Molecular structure and gene analysis of Ce3+-induced methanol dehydrogenase of Bradyrhizobium sp. MAFF211645
- (2011) Nanung Agus Fitriyanto et al. JOURNAL OF BIOSCIENCE AND BIOENGINEERING
- Diversity of the Human Skin Microbiome Early in Life
- (2011) Kimberly A. Capone et al. JOURNAL OF INVESTIGATIVE DERMATOLOGY
- Leaf and root pectin methylesterase activity and 13C/12C stable isotopic ratio measurements of methanol emissions give insight into methanol production in Lycopersicon esculentum
- (2011) Patricia Yoshino Oikawa et al. NEW PHYTOLOGIST
- Exploring the Diversity of Gardnerella vaginalis in the Genitourinary Tract Microbiota of Monogamous Couples Through Subtle Nucleotide Variation
- (2011) A. Murat Eren et al. PLoS One
- Monomethylamine as a Nitrogen Source for a Nonmethylotrophic Bacterium, Agrobacterium tumefaciens
- (2010) Y. Chen et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Search and clustering orders of magnitude faster than BLAST
- (2010) Robert C. Edgar BIOINFORMATICS
- Are root exudates more important than other sources of rhizodeposits in structuring rhizosphere bacterial communities?
- (2010) Paul G. Dennis et al. FEMS MICROBIOLOGY ECOLOGY
- Phylogenetic and gene-centric metagenomics of the canine intestinal microbiome reveals similarities with humans and mice
- (2010) Kelly S Swanson et al. ISME Journal
- QIIME allows analysis of high-throughput community sequencing data
- (2010) J Gregory Caporaso et al. NATURE METHODS
- Shifting carbon flow from roots into associated microbial communities in response to elevated atmospheric CO2
- (2010) B. Drigo et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Exploration of hitherto-uncultured bacteria from the rhizosphere
- (2009) Ulisses Nunes da Rocha et al. FEMS MICROBIOLOGY ECOLOGY
- Occurrence and diversity of nitrogen-fixingSphingomonasbacteria associated with rice plants grown in Brazil
- (2009) Sandy Sampaio Videira et al. FEMS MICROBIOLOGY LETTERS
- Aerobic methanol-oxidizingBacteriaâin soil
- (2009) Steffen Kolb FEMS MICROBIOLOGY LETTERS
- Ideonella azotifigens sp. nov., an aerobic diazotroph of the Betaproteobacteria isolated from grass rhizosphere soil, and emended description of the genus Ideonella
- (2009) J. D. Noar et al. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
- Flavobacterium glycines sp. nov., a facultative methylotroph isolated from the rhizosphere of soybean
- (2009) M. Madhaiyan et al. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
- Community proteogenomics reveals insights into the physiology of phyllosphere bacteria
- (2009) N. Delmotte et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Cultivation-Independent Characterization of Methylobacterium Populations in the Plant Phyllosphere by Automated Ribosomal Intergenic Spacer Analysis
- (2008) C. Knief et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Structural and functional studies of a family of Dictyostelium discoideum developmentally regulated, prestalk genes coding for small proteins
- (2008) Juan J Vicente et al. BMC MICROBIOLOGY
- Novel methylotrophic bacteria isolated from the River Thames (London, UK)
- (2008) Rich Boden et al. ENVIRONMENTAL MICROBIOLOGY
- Marine methylotrophs revealed by stable-isotope probing, multiple displacement amplification and metagenomics
- (2008) Josh D. Neufeld et al. ENVIRONMENTAL MICROBIOLOGY
- Bacterial Tag–Encoded FLX Amplicon Pyrosequencing (bTEFAP) for Microbiome Studies: Bacterial Diversity in the Ileum of Newly Weaned Salmonella-Infected Pigs
- (2008) Scot E. Dowd et al. Foodborne Pathogens and Disease
- Plant host habitat and root exudates shape soil bacterial community structure
- (2008) Feth el Zahar Haichar et al. ISME Journal
- Characterization of a Novel Methanol Dehydrogenase in Representatives of Burkholderiales: Implications for Environmental Detection of Methylotrophy and Evidence for Convergent Evolution
- (2008) M. G. Kalyuzhnaya et al. JOURNAL OF BACTERIOLOGY
- High-resolution metagenomics targets specific functional types in complex microbial communities
- (2008) Marina G Kalyuzhnaya et al. NATURE BIOTECHNOLOGY
Publish scientific posters with Peeref
Peeref publishes scientific posters from all research disciplines. Our Diamond Open Access policy means free access to content and no publication fees for authors.
Learn MoreBecome a Peeref-certified reviewer
The Peeref Institute provides free reviewer training that teaches the core competencies of the academic peer review process.
Get Started