Rapid and Culture Free Identification of Francisella in Hare Carcasses by High-Resolution Tandem Mass Spectrometry Proteotyping

Evaluation of Sample Preparation Methods for Fast Proteotyping of Microorganisms by Tandem Mass Spectrometry

(2019) Karim Hayoun et al.   Frontiers in Microbiology

Revisiting Francisella tularensis subsp. holarctica, Causative Agent of Tularemia in Germany With Bioinformatics: New Insights in Genome Structure, DNA Methylation and Comparative Phylogenetic Analysis

(2018) Anne Busch et al.   Frontiers in Microbiology

Proteotyping bacteria: Characterization, differentiation and identification of pneumococcus and other species within the Mitis Group of the genus Streptococcus by tandem mass spectrometry proteomics

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Renal oncocytoma characterized by the defective complex I of the respiratory chain boosts the synthesis of the ROS scavenger glutathione

(2017) Gerrit Kürschner et al.   Oncotarget

The use of Matrix-assisted laser desorption ionization-time of flight mass spectrometry in the identification of Francisella tularensis

(2016) Onur Karatuna et al.   Bosnian Journal of Basic Medical Sciences

A Novel Peptidomic Approach to Strain Typing of Clinical Acinetobacter baumannii Isolates Using Mass Spectrometry

(2016) H. Wang et al.   CLINICAL CHEMISTRY

Comparative Analysis of Proteome Patterns of Francisella tularensis Isolates from Patients and the Environment

(2016) Murat Kasap et al.   CURRENT MICROBIOLOGY

OpenMS: a flexible open-source software platform for mass spectrometry data analysis

(2016) Hannes L Röst et al.   NATURE METHODS

Recent development of mass spectrometry and proteomics applications in identification and typing of bacteria

(2016) Keding Cheng et al.   Proteomics Clinical Applications

Improved proteomic analysis following trichloroacetic acid extraction of Bacillus anthracis spore proteins

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Proteotyping: Proteomic characterization, classification and identification of microorganisms – A prospectus

(2015) Roger Karlsson et al.   SYSTEMATIC AND APPLIED MICROBIOLOGY

Mass Spectrometry-based PhyloProteomics (MSPP): A novel microbial typing Method

(2015) Andreas Erich Zautner et al.   Scientific Reports

Proteogenomic Biomarkers for Identification of Francisella Species and Subspecies by Matrix-Assisted Laser Desorption Ionization-Time-of-Flight Mass Spectrometry

(2014) Emie Durighello et al.   ANALYTICAL CHEMISTRY

Prokka: rapid prokaryotic genome annotation

(2014) T. Seemann   BIOINFORMATICS

Performance of seven serological assays for diagnosing tularemia

(2014) Valérie Chaignat et al.   BMC INFECTIOUS DISEASES

Minimal, encapsulated proteomic-sample processing applied to copy-number estimation in eukaryotic cells

(2014) Nils A Kulak et al.   NATURE METHODS

Serosurveillance for Francisella tularensis Among Wild Animals in Japan Using a Newly Developed Competitive Enzyme-Linked Immunosorbent Assay

(2014) Neekun Sharma et al.   VECTOR-BORNE AND ZOONOTIC DISEASES

MS-GF+ makes progress towards a universal database search tool for proteomics

(2014) Sangtae Kim et al.   Nature Communications

PhyloPhlAn is a new method for improved phylogenetic and taxonomic placement of microbes

(2013) Nicola Segata et al.   Nature Communications

Detection of Francisella tularensis-Specific Antibodies in Patients with Tularemia by a Novel Competitive Enzyme-Linked Immunosorbent Assay

(2012) Neekun Sharma et al.   Clinical and Vaccine Immunology

SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing

(2012) Anton Bankevich et al.   JOURNAL OF COMPUTATIONAL BIOLOGY

The Francisella Tularensis Proteome and its Recognition by Antibodies

(2011) Sara L. N. Kilmury et al.   Frontiers in Microbiology

Identification of Francisella tularensis by Whole-Cell Matrix-Assisted Laser Desorption Ionization-Time of Flight Mass Spectrometry: Fast, Reliable, Robust, and Cost-Effective Differentiation on Species and Subspecies Levels

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Statistical Design of Quantitative Mass Spectrometry-Based Proteomic Experiments

(2009) Ann L. Oberg et al.   JOURNAL OF PROTEOME RESEARCH

MaxQuant enables high peptide identification rates, individualized p.p.b.-range mass accuracies and proteome-wide protein quantification

(2008) Jürgen Cox et al.   NATURE BIOTECHNOLOGY