DNA methylation changes during preimplantation development reveal inter-species differences and reprogramming events at imprinted genes

ZNF445 is a primary regulator of genomic imprinting

(2019) Nozomi Takahashi et al.   GENES & DEVELOPMENT

Methylome Dynamics of Bovine Gametes and in vivo Early Embryos

(2019) Jingyue Ellie Duan et al.   Frontiers in Genetics

Genome-wide assessment of DNA methylation in mouse oocytes reveals effects associated with in vitro growth, superovulation, and sexual maturity

(2019) Maria Desemparats Saenz-de-Juano et al.   Clinical Epigenetics

DNA methylomes of bovine gametes and in vivo produced preimplantation embryos

(2018) Zongliang Jiang et al.   BIOLOGY OF REPRODUCTION

MicroRNA-29b regulates DNA methylation by targeting Dnmt3a/3b and Tet1/2/3 in porcine early embryo development

(2018) Zhiren Zhang et al.   DEVELOPMENT GROWTH & DIFFERENTIATION

Implications of CpG islands on chromosomal architectures and modes of global gene regulation

(2018) Samuel Beck et al.   NUCLEIC ACIDS RESEARCH

Transcriptome analyses of rhesus monkey preimplantation embryos reveal a reduced capacity for DNA double-strand break repair in primate oocytes and early embryos

(2017) Xinyi Wang et al.   GENOME RESEARCH

Single-cell DNA methylome sequencing of human preimplantation embryos

(2017) Ping Zhu et al.   NATURE GENETICS

Effect of bovine oviductal fluid on development and quality of bovine embryos produced in vitro

(2017) Ricaurte Lopera-Vasquez et al.   REPRODUCTION FERTILITY AND DEVELOPMENT

DNA methylation and gene expression changes derived from assisted reproductive technologies can be decreased by reproductive fluids

(2017) Sebastian Canovas et al.   eLife

Pervasive polymorphic imprinted methylation in the human placenta

(2016) Courtney W. Hanna et al.   GENOME RESEARCH

Neuronatin Protein in Health and Disease

(2016) Priyamvada M. Pitale et al.   JOURNAL OF CELLULAR PHYSIOLOGY

Transient transcription in the early embryo sets an epigenetic state that programs postnatal growth

(2016) Maxim V C Greenberg et al.   NATURE GENETICS

Human Oocyte-Derived Methylation Differences Persist in the Placenta Revealing Widespread Transient Imprinting

(2016) Marta Sanchez-Delgado et al.   PLoS Genetics

Dynamic expression of DNA methyltransferases (DNMTs) in oocytes and early embryos

(2015) Fatma Uysal et al.   BIOCHIMIE

DNA methylation dynamics at imprinted genes during bovine pre-implantation embryo development

(2015) Alan M O’Doherty et al.   BMC DEVELOPMENTAL BIOLOGY

The expression patterns of DNA methylation reprogramming related genes are associated with the developmental competence of cloned embryos after zygotic genome activation in pigs

(2015) Yanjun Huan et al.   GENE EXPRESSION PATTERNS

Characterization of global loss of imprinting in fetal overgrowth syndrome induced by assisted reproduction

(2015) Zhiyuan Chen et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

High Frequency of Imprinted Methylation Errors in Human Preimplantation Embryos

(2015) Carlee R. White et al.   Scientific Reports

Early Developmental and Evolutionary Origins of Gene Body DNA Methylation Patterns in Mammalian Placentas

(2015) Diane I. Schroeder et al.   PLoS Genetics

Spatiotemporal Expression of DNA Demethylation Enzymes and Histone Demethylases in Bovine Embryos

(2014) Florence Pagé-Larivière et al.   Cellular Reprogramming

The Gpr1/Zdbf2 locus provides new paradigms for transient and dynamic genomic imprinting in mammals

(2014) R. Duffie et al.   GENES & DEVELOPMENT

DNA demethylation, Tet proteins and 5-hydroxymethylcytosine in epigenetic reprogramming: An emerging complex story

(2014) Peter W.S. Hill et al.   GENOMICS

DNA methylation dynamics of the human preimplantation embryo

(2014) Zachary D. Smith et al.   NATURE

The DNA methylation landscape of human early embryos

(2014) Hongshan Guo et al.   NATURE

Single-cell genome-wide bisulfite sequencing for assessing epigenetic heterogeneity

(2014) Sébastien A Smallwood et al.   NATURE METHODS

Genome-Wide Analysis of DNA Methylation Dynamics during Early Human Development

(2014) Hiroaki Okae et al.   PLoS Genetics

Dynamics of TET family expression in porcine preimplantation embryos is related to zygotic genome activation and required for the maintenance of NANOG

(2013) Kiho Lee et al.   DEVELOPMENTAL BIOLOGY

Epigenetic disturbances in in vitro cultured gametes and embryos: implications for human assisted reproduction

(2013) Nady el Hajj et al.   FERTILITY AND STERILITY

PaternalGNASMutations Lead to Severe Intrauterine Growth Retardation (IUGR) and Provide Evidence for a Role of XLαs in Fetal Development

(2013) Nicolas Richard et al.   JOURNAL OF CLINICAL ENDOCRINOLOGY & METABOLISM

Genetic programs in human and mouse early embryos revealed by single-cell RNA sequencing

(2013) Zhigang Xue et al.   NATURE

Dynamics of DNA Methylation during Early Development of the Preimplantation Bovine Embryo

(2013) Kyle B. Dobbs et al.   PLoS One

Dynamic reprogramming of 5-hydroxymethylcytosine during early porcine embryogenesis

(2013) Zubing Cao et al.   THERIOGENOLOGY

Mouse Oocyte Methylomes at Base Resolution Reveal Genome-Wide Accumulation of Non-CpG Methylation and Role of DNA Methyltransferases

(2013) Kenjiro Shirane et al.   PLoS Genetics

Evaluation and optimisation of preparative semi-automated electrophoresis systems for Illumina library preparation

(2012) Michael A. Quail et al.   ELECTROPHORESIS

Protection against De Novo Methylation Is Instrumental in Maintaining Parent-of-Origin Methylation Inherited from the Gametes

(2012) Charlotte Proudhon et al.   MOLECULAR CELL

PGC7 binds histone H3K9me2 to protect against conversion of 5mC to 5hmC in early embryos

(2012) Toshinobu Nakamura et al.   NATURE

A unique regulatory phase of DNA methylation in the early mammalian embryo

(2012) Zachary D. Smith et al.   NATURE

Trim28 Is Required for Epigenetic Stability During Mouse Oocyte to Embryo Transition

(2012) D. M. Messerschmidt et al.   SCIENCE

Contribution of Intragenic DNA Methylation in Mouse Gametic DNA Methylomes to Establish Oocyte-Specific Heritable Marks

(2012) Hisato Kobayashi et al.   PLoS Genetics

Waves of early transcriptional activation and pluripotency program initiation during human preimplantation development

(2011) R. Vassena et al.   DEVELOPMENT

Dynamic stage-specific changes in imprinted differentially methylated regions during early mammalian development and prevalence of non-CpG methylation in oocytes

(2011) S.-i. Tomizawa et al.   DEVELOPMENT

DNA methylation in porcine preimplantation embryos developed in vivo and produced by in vitro fertilization, parthenogenetic activation and somatic cell nuclear transfer

(2011) Rahul S. Deshmukh et al.   Epigenetics

Localization of DNA methyltransferase-1 during oocyte differentiation, in vitro maturation and early embryonic development in cow

(2011) V. Lodde et al.   EUROPEAN JOURNAL OF HISTOCHEMISTRY

In Embryonic Stem Cells, ZFP57/KAP1 Recognize a Methylated Hexanucleotide to Affect Chromatin and DNA Methylation of Imprinting Control Regions

(2011) Simon Quenneville et al.   MOLECULAR CELL

Dynamic CpG island methylation landscape in oocytes and preimplantation embryos

(2011) Sébastien A Smallwood et al.   NATURE GENETICS

Reprogramming of the paternal genome upon fertilization involves genome-wide oxidation of 5-methylcytosine

(2011) Khursheed Iqbal et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Effects of porcine pre-ovulatory oviductal fluid on boar sperm function

(2010) P. Coy et al.   THERIOGENOLOGY

Preimplantation expression of the somatic form of Dnmt1 suggests a role in the inheritance of genomic imprints

(2008) M Cecilia Cirio et al.   BMC DEVELOPMENTAL BIOLOGY

A Maternal-Zygotic Effect Gene, Zfp57, Maintains Both Maternal and Paternal Imprints

(2008) Xiajun Li et al.   DEVELOPMENTAL CELL

Alternative splicing and expression analysis of bovine DNA methyltransferase 1

(2008) D. Fischer Russell et al.   DEVELOPMENTAL DYNAMICS

Maternal and zygotic Dnmt1 are necessary and sufficient for the maintenance of DNA methylation imprints during preimplantation development

(2008) R. Hirasawa et al.   GENES & DEVELOPMENT

Hypomethylation of multiple imprinted loci in individuals with transient neonatal diabetes is associated with mutations in ZFP57

(2008) Deborah J G Mackay et al.   NATURE GENETICS

Maintenance of genomic methylation patterns during preimplantation development requires the somatic form of DNA methyltransferase 1

(2007) Yukiko Kurihara et al.   DEVELOPMENTAL BIOLOGY