The DNA methylation landscape of human early embryos

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Transcriptional and Epigenetic Dynamics during Specification of Human Embryonic Stem Cells

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Epigenomic Analysis of Multilineage Differentiation of Human Embryonic Stem Cells

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Single-cell methylome landscapes of mouse embryonic stem cells and early embryos analyzed using reduced representation bisulfite sequencing

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Single-cell RNA-Seq profiling of human preimplantation embryos and embryonic stem cells

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Mouse Oocyte Methylomes at Base Resolution Reveal Genome-Wide Accumulation of Non-CpG Methylation and Role of DNA Methyltransferases

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Early Embryos Reprogram DNA Methylation in Two Steps

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Human pre-implantation embryo development

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Retain singleton or twins? Multifetal pregnancy reduction strategies in triplet pregnancies with monochorionic twins

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The Dynamics of Genome-wide DNA Methylation Reprogramming in Mouse Primordial Germ Cells

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A unique regulatory phase of DNA methylation in the early mammalian embryo

(2012) Zachary D. Smith et al.   NATURE

An integrated encyclopedia of DNA elements in the human genome

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Tracking the progression of the human inner cell mass during embryonic stem cell derivation

(2012) Thomas O'Leary et al.   NATURE BIOTECHNOLOGY

Functions of DNA methylation: islands, start sites, gene bodies and beyond

(2012) Peter A. Jones   NATURE REVIEWS GENETICS

DNA methylation dynamics during the mammalian life cycle

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Bis-SNP: Combined DNA methylation and SNP calling for Bisulfite-seq data

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Bismark: a flexible aligner and methylation caller for Bisulfite-Seq applications

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Sperm Methylation Profiles Reveal Features of Epigenetic Inheritance and Evolution in Primates

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Generation and replication-dependent dilution of 5fC and 5caC during mouse preimplantation development

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Dynamic stage-specific changes in imprinted differentially methylated regions during early mammalian development and prevalence of non-CpG methylation in oocytes

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The role of Tet3 DNA dioxygenase in epigenetic reprogramming by oocytes

(2011) Tian-Peng Gu et al.   NATURE

Dynamic CpG island methylation landscape in oocytes and preimplantation embryos

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Preparation of reduced representation bisulfite sequencing libraries for genome-scale DNA methylation profiling

(2011) Hongcang Gu et al.   Nature Protocols

Replication-Dependent Loss of 5-Hydroxymethylcytosine in Mouse Preimplantation Embryos

(2011) A. Inoue et al.   SCIENCE

Serum progesterone concentration on day of HCG administration and IVF outcome

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Epigenetic Reprogramming in Plant and Animal Development

(2010) Suhua Feng et al.   SCIENCE

Human DNA methylomes at base resolution show widespread epigenomic differences

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mRNA-Seq whole-transcriptome analysis of a single cell

(2009) Fuchou Tang et al.   NATURE METHODS

Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources

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The impact of retrotransposons on human genome evolution

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Maternal and zygotic Dnmt1 are necessary and sufficient for the maintenance of DNA methylation imprints during preimplantation development

(2008) R. Hirasawa et al.   GENES & DEVELOPMENT

Parental origin of chromatin in human monopronuclear zygotes revealed by asymmetric histone methylation patterns, differs between IVF and ICSI

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Epigenetic events in mammalian germ-cell development: reprogramming and beyond

(2008) Hiroyuki Sasaki et al.   NATURE REVIEWS GENETICS

Maintenance of genomic methylation patterns during preimplantation development requires the somatic form of DNA methyltransferase 1

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