ProteoClade: A taxonomic toolkit for multi-species and metaproteomic analysis

Mass Spectrometry–Based Proteomics Reveals Potential Roles of NEK9 and MAP2K4 in Resistance to PI3K Inhibition in Triple-Negative Breast Cancers

(2018) Filip Mundt et al.   CANCER RESEARCH

Unipept 4.0: Functional Analysis of Metaproteome Data

(2018) Robbert Gurdeep Singh et al.   JOURNAL OF PROTEOME RESEARCH

UniProt: a worldwide hub of protein knowledge

(2018)   NUCLEIC ACIDS RESEARCH

WebGestalt 2017: a more comprehensive, powerful, flexible and interactive gene set enrichment analysis toolkit

(2017) Jing Wang et al.   NUCLEIC ACIDS RESEARCH

Unipept web services for metaproteomics analysis

(2016) Bart Mesuere et al.   BIOINFORMATICS

Ultra-deep and quantitative saliva proteome reveals dynamics of the oral microbiome

(2016) Niklas Grassl et al.   Genome Medicine

The Unipept metaproteomics analysis pipeline

(2015) Bart Mesuere et al.   PROTEOMICS

Patient-Derived Xenograft Models: An Emerging Platform for Translational Cancer Research

(2014) M. Hidalgo et al.   Cancer Discovery

Evaluating the Impact of Different Sequence Databases on Metaproteome Analysis: Insights from a Lab-Assembled Microbial Mixture

(2013) Alessandro Tanca et al.   PLoS One

Bacterial diversity in the oral cavity of 10 healthy individuals

(2010) Elisabeth M Bik et al.   ISME Journal

Depletion of Abundant Plasma Proteins and Limitations of Plasma Proteomics

(2010) Chengjian Tu et al.   JOURNAL OF PROTEOME RESEARCH

The Human Oral Microbiome Database: a web accessible resource for investigating oral microbe taxonomic and genomic information

(2010) T. Chen et al.   Database-The Journal of Biological Databases and Curation