ACBM: An Integrated Agent and Constraint Based Modeling Framework for Simulation of Microbial Communities
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Title
ACBM: An Integrated Agent and Constraint Based Modeling Framework for Simulation of Microbial Communities
Authors
Keywords
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Journal
Scientific Reports
Volume 10, Issue 1, Pages -
Publisher
Springer Science and Business Media LLC
Online
2020-05-26
DOI
10.1038/s41598-020-65659-w
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Note: Only part of the references are listed.- Development of a regulatory defined medium using a system-oriented strategy to reduce the intracellular constraints
- (2019) Ehsan Motamedian et al. PROCESS BIOCHEMISTRY
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- (2018) Ana L. Quiroga-Campano et al. METABOLIC ENGINEERING
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- (2017) Eugen Bauer et al. PLoS Computational Biology
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- (2017) Godefroid Charbon et al. PLoS Genetics
- Kinetic Modeling of Mammalian Cell Culture Bioprocessing: The Quest to Advance Biomanufacturing
- (2017) Sarantos Kyriakopoulos et al. Biotechnology Journal
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- (2016) Tatiana Shashkova et al. PLoS One
- Anoxic Conditions Promote Species-Specific Mutualism between Gut MicrobesIn Silico
- (2015) Almut Heinken et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- A multi-pronged investigation into the effect of glucose starvation and culture duration on fed-batch CHO cell culture
- (2015) Yuzhou Fan et al. BIOTECHNOLOGY AND BIOENGINEERING
- Genome-scale metabolic reconstructions of Bifidobacterium adolescentis L2-32 and Faecalibacterium prausnitzii A2-165 and their interaction
- (2014) Ibrahim E El-Semman et al. BMC Systems Biology
- d-OptCom: Dynamic Multi-level and Multi-objective Metabolic Modeling of Microbial Communities
- (2014) Ali R. Zomorrodi et al. ACS Synthetic Biology
- Metabolic Resource Allocation in Individual Microbes Determines Ecosystem Interactions and Spatial Dynamics
- (2014) William R. Harcombe et al. Cell Reports
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- (2013) Matthew B. Biggs et al. PLoS One
- The formate channel FocA exports the products of mixed-acid fermentation
- (2012) W. Lu et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Metabolic network reconstruction and genome-scale model of butanol-producing strain Clostridium beijerinckii NCIMB 8052
- (2011) Caroline B Milne et al. BMC Systems Biology
- Quantitative prediction of cellular metabolism with constraint-based models: the COBRA Toolbox v2.0
- (2011) Jan Schellenberger et al. Nature Protocols
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- (2010) Jeffrey D Orth et al. NATURE BIOTECHNOLOGY
- Growth phase-dependent changes in the expression of global regulatory genes and associated metabolic pathways in Escherichia coli
- (2008) Mahbuba Rahman et al. BIOTECHNOLOGY LETTERS
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