An evolutionary path to altered cofactor specificity in a metalloenzyme
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Title
An evolutionary path to altered cofactor specificity in a metalloenzyme
Authors
Keywords
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Journal
Nature Communications
Volume 11, Issue 1, Pages -
Publisher
Springer Science and Business Media LLC
Online
2020-06-01
DOI
10.1038/s41467-020-16478-0
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Note: Only part of the references are listed.- Staphylococcus aureus heme and siderophore-iron acquisition pathways
- (2019) Brigid S. Conroy et al. BIOMETALS
- Coordination chemistry within a protein host: regulation of the secondary coordination sphere
- (2018) Samuel I. Mann et al. CHEMICAL COMMUNICATIONS
- To what extent do structural changes in catalytic metal sites affect enzyme function?
- (2018) Yana Valasatava et al. JOURNAL OF INORGANIC BIOCHEMISTRY
- A charge polarization model for the metal-specific activity of superoxide dismutases
- (2018) Anna Barwinska-Sendra et al. PHYSICAL CHEMISTRY CHEMICAL PHYSICS
- Differential depth distribution of microbial function and putative symbionts through sediment-hosted aquifers in the deep terrestrial subsurface
- (2018) Alexander J. Probst et al. Nature Microbiology
- Aureo Wiki ̵ The repository of the Staphylococcus aureus research and annotation community
- (2017) Stephan Fuchs et al. INTERNATIONAL JOURNAL OF MEDICAL MICROBIOLOGY
- Asgard archaea illuminate the origin of eukaryotic cellular complexity
- (2017) Katarzyna Zaremba-Niedzwiedzka et al. NATURE
- ModelFinder: fast model selection for accurate phylogenetic estimates
- (2017) Subha Kalyaanamoorthy et al. NATURE METHODS
- Architecture of a Species: Phylogenomics of Staphylococcus aureus
- (2017) Paul J. Planet et al. TRENDS IN MICROBIOLOGY
- A Superoxide Dismutase Capable of Functioning with Iron or Manganese Promotes the Resistance of Staphylococcus aureus to Calprotectin and Nutritional Immunity
- (2017) Yuritzi M. Garcia et al. PLoS Pathogens
- Enhancing Mn(II)-Binding and Manganese Peroxidase Activity in a Designed Cytochrome c Peroxidase through Fine-Tuning Secondary-Sphere Interactions
- (2016) Parisa Hosseinzadeh et al. BIOCHEMISTRY
- Design and fine-tuning redox potentials of metalloproteins involved in electron transfer in bioenergetics
- (2016) Parisa Hosseinzadeh et al. BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS
- ConSurf 2016: an improved methodology to estimate and visualize evolutionary conservation in macromolecules
- (2016) Haim Ashkenazy et al. NUCLEIC ACIDS RESEARCH
- Improvements to PATRIC, the all-bacterial Bioinformatics Database and Analysis Resource Center
- (2016) Alice R. Wattam et al. NUCLEIC ACIDS RESEARCH
- W-IQ-TREE: a fast online phylogenetic tool for maximum likelihood analysis
- (2016) Jana Trifinopoulos et al. NUCLEIC ACIDS RESEARCH
- Molecular Designs for Controlling the Local Environments around Metal Ions
- (2015) Sarah A. Cook et al. ACCOUNTS OF CHEMICAL RESEARCH
- Unusual biology across a group comprising more than 15% of domain Bacteria
- (2015) Christopher T. Brown et al. NATURE
- Complex archaea that bridge the gap between prokaryotes and eukaryotes
- (2015) Anja Spang et al. NATURE
- eggNOG 4.5: a hierarchical orthology framework with improved functional annotations for eukaryotic, prokaryotic and viral sequences
- (2015) Jaime Huerta-Cepas et al. NUCLEIC ACIDS RESEARCH
- VFDB 2016: hierarchical and refined dataset for big data analysis—10 years on
- (2015) Lihong Chen et al. NUCLEIC ACIDS RESEARCH
- Compact graphical representation of phylogenetic data and metadata with GraPhlAn
- (2015) Francesco Asnicar et al. PeerJ
- RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies
- (2014) Alexandros Stamatakis BIOINFORMATICS
- Superoxide Dismutases and Superoxide Reductases
- (2014) Yuewei Sheng et al. CHEMICAL REVIEWS
- Novel staphylococcal species that form part of a Staphylococcus aureus-related complex: the non-pigmented Staphylococcus argenteus sp. nov. and the non-human primate-associated Staphylococcus schweitzeri sp. nov.
- (2014) S. Y. C. Tong et al. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
- Intracellular Hydrogen Peroxide and Superoxide Poison 3-Deoxy-D-Arabinoheptulosonate 7-Phosphate Synthase, the First Committed Enzyme in the Aromatic Biosynthetic Pathway of Escherichia coli
- (2014) J. M. Sobota et al. JOURNAL OF BACTERIOLOGY
- IQ-TREE: A Fast and Effective Stochastic Algorithm for Estimating Maximum-Likelihood Phylogenies
- (2014) Lam-Tung Nguyen et al. MOLECULAR BIOLOGY AND EVOLUTION
- EGN: a wizard for construction of gene and genome similarity networks
- (2013) Sébastien Halary et al. BMC EVOLUTIONARY BIOLOGY
- MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability
- (2013) K. Katoh et al. MOLECULAR BIOLOGY AND EVOLUTION
- Superoxide poisons mononuclear iron enzymes by causing mismetallation
- (2013) Mianzhi Gu et al. MOLECULAR MICROBIOLOGY
- Easyfig: a genome comparison visualizer
- (2011) M. J. Sullivan et al. BIOINFORMATICS
- ProtTest 3: fast selection of best-fit models of protein evolution
- (2011) Diego Darriba et al. BIOINFORMATICS
- BLAST Ring Image Generator (BRIG): simple prokaryote genome comparisons
- (2011) Nabil-Fareed Alikhan et al. BMC GENOMICS
- Nutrient Metal Sequestration by Calprotectin Inhibits Bacterial Superoxide Defense, Enhancing Neutrophil Killing of Staphylococcus aureus
- (2011) Thomas E. Kehl-Fie et al. Cell Host & Microbe
- Cellular Iron Distribution in Bacillus anthracis
- (2011) W. Y. Tu et al. JOURNAL OF BACTERIOLOGY
- Conversion of the metal-specific activity of Escherichia coli Mn-SOD by site-directed mutagenesis of Gly165Thr
- (2010) Masaki Osawa et al. BIOCHIMICA ET BIOPHYSICA ACTA-PROTEINS AND PROTEOMICS
- Cytoscape 2.8: new features for data integration and network visualization
- (2010) M. E. Smoot et al. BIOINFORMATICS
- FastTree 2 – Approximately Maximum-Likelihood Trees for Large Alignments
- (2010) Morgan N. Price et al. PLoS One
- History of biological metal utilization inferred through phylogenomic analysis of protein structures
- (2010) C. L. Dupont et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- IsdA and IsdB antibodies protect mice against Staphylococcus aureus abscess formation and lethal challenge
- (2010) Hwan Keun Kim et al. VACCINE
- Understanding the influence of the protein environment on the Mn(II) centers in Superoxide Dismutases using High-Field Electron Paramagnetic Resonance
- (2009) Leandro C. Tabares et al. BIOCHIMICA ET BIOPHYSICA ACTA-PROTEINS AND PROTEOMICS
- Evolutionary formation of new protein folds is linked to metallic cofactor recruitment
- (2009) Hong-Fang Ji et al. BIOESSAYS
- trimAl: a tool for automated alignment trimming in large-scale phylogenetic analyses
- (2009) S. Capella-Gutierrez et al. BIOINFORMATICS
- Biopython: freely available Python tools for computational molecular biology and bioinformatics
- (2009) P. J. A. Cock et al. BIOINFORMATICS
- Jalview Version 2--a multiple sequence alignment editor and analysis workbench
- (2009) A. M. Waterhouse et al. BIOINFORMATICS
- Comprehensive identification of essential Staphylococcus aureus genes using Transposon-Mediated Differential Hybridisation (TMDH)
- (2009) Roy R Chaudhuri et al. BMC GENOMICS
- Genetic requirements for Staphylococcus aureus abscess formation and persistence in host tissues
- (2009) Alice G. Cheng et al. FASEB JOURNAL
- Manganese import is a key element of the OxyR response to hydrogen peroxide inEscherichia coli
- (2009) Adil Anjem et al. MOLECULAR MICROBIOLOGY
- Metalloproteins and metal sensing
- (2009) Kevin J. Waldron et al. NATURE
- Redox Tuning over Almost 1 V in a Structurally Conserved Active Site: Lessons from Fe-Containing Superoxide Dismutase
- (2008) Anne-Frances Miller ACCOUNTS OF CHEMICAL RESEARCH
- Tuning the Redox Properties of Manganese(II) and Its Implications to the Electrochemistry of Manganese and Iron Superoxide Dismutases
- (2008) Martin Sjödin et al. INORGANIC CHEMISTRY
- Metal ions in biological catalysis: from enzyme databases to general principles
- (2008) Claudia Andreini et al. JOURNAL OF BIOLOGICAL INORGANIC CHEMISTRY
- Turning a hobby into a job: How duplicated genes find new functions
- (2008) Gavin C. Conant et al. NATURE REVIEWS GENETICS
- Metal Chelation and Inhibition of Bacterial Growth in Tissue Abscesses
- (2008) Brian D. Corbin et al. SCIENCE
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