Metabolite Sequestration Enables Rapid Recovery from Fatty Acid Depletion in Escherichia coli

Coupling feedback genetic circuits with growth phenotype for dynamic population control and intelligent bioproduction

(2019) Yongkun Lv et al.   METABOLIC ENGINEERING

A Map of Protein-Metabolite Interactions Reveals Principles of Chemical Communication

(2018) Ilaria Piazza et al.   CELL

Dynamic metabolic control: towards precision engineering of metabolism

(2018) Di Liu et al.   JOURNAL OF INDUSTRIAL MICROBIOLOGY & BIOTECHNOLOGY

Metabolic Feedback Circuits Provide Rapid Control of Metabolite Dynamics

(2018) Di Liu et al.   ACS Synthetic Biology

Dynamic control of endogenous metabolism with combinatorial logic circuits

(2018) Felix Moser et al.   Molecular Systems Biology

Dynamic disorder in simple enzymatic reactions induces stochastic amplification of substrate

(2017) Ankit Gupta et al.   Journal of the Royal Society Interface

Dynamic regulation of metabolic flux in engineered bacteria using a pathway-independent quorum-sensing circuit

(2017) Apoorv Gupta et al.   NATURE BIOTECHNOLOGY

Fundamental Design Principles for Transcription-Factor-Based Metabolite Biosensors

(2017) Ahmad A. Mannan et al.   ACS Synthetic Biology

The EcoCyc database: reflecting new knowledge aboutEscherichia coliK-12

(2016) Ingrid M. Keseler et al.   NUCLEIC ACIDS RESEARCH

Multigene Editing in the Escherichia coli Genome via the CRISPR-Cas9 System

(2015) Yu Jiang et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Mechanistic links between cellular trade-offs, gene expression, and growth

(2015) Andrea Y. Weiße et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Phenotypic bistability in Escherichia coli's central carbon metabolism

(2014) O. Kotte et al.   Molecular Systems Biology

Coordination of microbial metabolism

(2014) Victor Chubukov et al.   NATURE REVIEWS MICROBIOLOGY

Bet-hedging during bacterial diauxic shift

(2014) A. Solopova et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Memory and Fitness Optimization of Bacteria under Fluctuating Environments

(2014) Guillaume Lambert et al.   PLoS Genetics

Metabolic Control of Persister Formation in Escherichia coli

(2013) Stephanie M. Amato et al.   MOLECULAR CELL

Negative Feedback Regulation of Fatty Acid Production Based on a Malonyl-CoA Sensor–Actuator

(2013) Di Liu et al.   ACS Synthetic Biology

Design of a dynamic sensor-regulator system for production of chemicals and fuels derived from fatty acids

(2012) Fuzhong Zhang et al.   NATURE BIOTECHNOLOGY

Regulatory architecture determines optimal regulation of gene expression in metabolic pathways

(2012) V. Chubukov et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Negative auto-regulation increases the input dynamic-range of the arabinose system of Escherichia coli

(2011) Daniel Madar et al.   BMC Systems Biology

BglBrick vectors and datasheets: A synthetic biology platform for gene expression

(2011) Taek Lee et al.   Journal of Biological Engineering

Bacterial adaptation through distributed sensing of metabolic fluxes

(2010) Oliver Kotte et al.   Molecular Systems Biology

Sequential Activation of Metabolic Pathways: a Dynamic Optimization Approach

(2009) Diego A. Oyarzún et al.   BULLETIN OF MATHEMATICAL BIOLOGY

A One Pot, One Step, Precision Cloning Method with High Throughput Capability

(2008) Carola Engler et al.   PLoS One

Dynamics and Design Principles of a Basic Regulatory Architecture Controlling Metabolic Pathways

(2008) Chen-Shan Chin et al.   PLOS BIOLOGY