Genetic algorithm-based personalized models of human cardiac action potential

Open-Source Multiparametric Optocardiography

(2019) Brianna Cathey et al.   Scientific Reports

RHYTHM: An Open Source Imaging Toolkit for Cardiac Panoramic Optical Mapping

(2018) Christopher Gloschat et al.   Scientific Reports

Improving cardiomyocyte model fidelity and utility via dynamic electrophysiology protocols and optimization algorithms

(2016) Trine Krogh-Madsen et al.   JOURNAL OF PHYSIOLOGY-LONDON

Near-optimal probabilistic RNA-seq quantification

(2016) Nicolas L Bray et al.   NATURE BIOTECHNOLOGY

Transmural APD gradient synchronizes repolarization in the human left ventricular wall

(2015) Bastiaan J. Boukens et al.   CARDIOVASCULAR RESEARCH

Cell-Specific Cardiac Electrophysiology Models

(2015) Willemijn Groenendaal et al.   PLoS Computational Biology

MOIRAI: a compact workflow system for CAGE analysis

(2014) Akira Hasegawa et al.   BMC BIOINFORMATICS

A promoter-level mammalian expression atlas

(2014)   NATURE

Interactive visualization and analysis of large-scale sequencing datasets using ZENBU

(2014) Jessica Severin et al.   NATURE BIOTECHNOLOGY

Exploration and exploitation in evolutionary algorithms

(2013) Matej Črepinšek et al.   ACM COMPUTING SURVEYS

Cuckoo search: recent advances and applications

(2013) Xin-She Yang et al.   NEURAL COMPUTING & APPLICATIONS

“Good Enough Solutions” and the Genetics of Complex Diseases

(2012) James N. Weiss et al.   CIRCULATION RESEARCH

Optical mapping at increased illumination intensities

(2012) Giedrius Kanaporis et al.   JOURNAL OF BIOMEDICAL OPTICS

Exploiting mathematical models to illuminate electrophysiological variability between individuals

(2012) Amrita X. Sarkar et al.   JOURNAL OF PHYSIOLOGY-LONDON

Differential expression analysis of multifactor RNA-Seq experiments with respect to biological variation

(2012) Davis J. McCarthy et al.   NUCLEIC ACIDS RESEARCH

The role of dynamic instability and wavelength in arrhythmia maintenance as revealed by panoramic imaging with blebbistatin vs. 2,3-butanedione monoxime

(2011) Qing Lou et al.   AMERICAN JOURNAL OF PHYSIOLOGY-HEART AND CIRCULATORY PHYSIOLOGY

Simulation of the Undiseased Human Cardiac Ventricular Action Potential: Model Formulation and Experimental Validation

(2011) Thomas O'Hara et al.   PLoS Computational Biology

Uniqueness and Stability of Action Potential Models during Rest, Pacing, and Conduction Using Problem-Solving Environment

(2009) Leonid Livshitz et al.   BIOPHYSICAL JOURNAL

A meta-analysis of cardiac electrophysiology computational models

(2009) S. A. Niederer et al.   EXPERIMENTAL PHYSIOLOGY