Natural variation in the promoter of TGW2 determines grain width and weight in rice

Rice qGL3/OsPPKL1 Functions with the GSK3/SHAGGY-Like Kinase OsGSK3 to Modulate Brassinosteroid Signaling

(2019) Xiuying Gao et al.   PLANT CELL

GL3.3 , a Novel QTL Encoding a GSK3/SHAGGY-like Kinase, Epistatically Interacts with GS3 to Produce Extra-long Grains in Rice

(2018) Duo Xia et al.   Molecular Plant

TGW3 , a Major QTL that Negatively Modulates Grain Length and Weight in Rice

(2018) Jie-Zheng Ying et al.   Molecular Plant

A Novel QTL q TGW3 Encodes the GSK3/SHAGGY-Like Kinase OsGSK5/OsSK41 that Interacts with OsARF4 to Negatively Regulate Grain Size and Weight in Rice

(2018) Zejun Hu et al.   Molecular Plant

Pan-genome analysis highlights the extent of genomic variation in cultivated and wild rice

(2018) Qiang Zhao et al.   NATURE GENETICS

GS9 acts as a transcriptional activator to regulate rice grain shape and appearance quality

(2018) Dong-Sheng Zhao et al.   Nature Communications

Genomic variation in 3,010 diverse accessions of Asian cultivated rice

(2018) Wensheng Wang et al.   NATURE

Parallel selection on a dormancy gene during domestication of crops from multiple families

(2018) Min Wang et al.   NATURE GENETICS

OsACL-A2 negatively regulates cell death and disease resistance in rice

(2018) Banpu Ruan et al.   PLANT BIOTECHNOLOGY JOURNAL

The rice YGL gene encoding an Mg2+-chelatase ChlD subunit is affected by temperature for chlorophyll biosynthesis

(2017) Banpu Ruan et al.   JOURNAL OF PLANT BIOLOGY

Natural Variation in the Promoter of GSE5 Contributes to Grain Size Diversity in Rice

(2017) Penggen Duan et al.   Molecular Plant

NOG1 increases grain production in rice

(2017) Xing Huo et al.   Nature Communications

Signaling pathways of seed size control in plants

(2016) Na Li et al.   CURRENT OPINION IN PLANT BIOLOGY

OsSPL13 controls grain size in cultivated rice

(2016) Lizhen Si et al.   NATURE GENETICS

Parallel Domestication of theHeading Date 1Gene in Cereals

(2015) Huanhuan Liu et al.   MOLECULAR BIOLOGY AND EVOLUTION

A Rare Allele of GS2 Enhances Grain Size and Grain Yield in Rice

(2015) Jiang Hu et al.   Molecular Plant

Copy number variation at the GL7 locus contributes to grain size diversity in rice

(2015) Yuexing Wang et al.   NATURE GENETICS

The OsSPL16-GW7 regulatory module determines grain shape and simultaneously improves rice yield and grain quality

(2015) Shaokui Wang et al.   NATURE GENETICS

OryzaGenome: Genome Diversity Database of WildOryzaSpecies

(2015) Hajime Ohyanagi et al.   PLANT AND CELL PHYSIOLOGY

Regulation of OsGRF4 by OsmiR396 controls grain size and yield in rice

(2015) Penggen Duan et al.   Nature Plants

Trimmomatic: a flexible trimmer for Illumina sequence data

(2014) Anthony M. Bolger et al.   BIOINFORMATICS

The genetic basis of fruit morphology in horticultural crops: lessons from tomato and melon

(2014) Antonio J. Monforte et al.   JOURNAL OF EXPERIMENTAL BOTANY

Physalis floridana Cell Number Regulator1 encodes a cell membrane-anchored modulator of cell cycle and negatively controls fruit size

(2014) Zhichao Li et al.   JOURNAL OF EXPERIMENTAL BOTANY

Genomic analyses provide insights into the history of tomato breeding

(2014) Tao Lin et al.   NATURE GENETICS

Rare allele of a previously unidentified histone H4 acetyltransferase enhances grain weight, yield, and plant biomass in rice

(2014) Xian Jun Song et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Cell number regulator genes in Prunus provide candidate genes for the control of fruit size in sweet and sour cherry

(2013) P. De Franceschi et al.   MOLECULAR BREEDING

Loss of function of the IAA-glucose hydrolase gene TGW6 enhances rice grain weight and increases yield

(2013) Ken Ishimaru et al.   NATURE GENETICS

Dissecting yield-associated loci in super hybrid rice by resequencing recombinant inbred lines and improving parental genome sequences

(2013) Z.-Y. Gao et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The novel quantitative trait locus GL3.1 controls rice grain size and yield by regulating Cyclin-T1;3

(2012) Peng Qi et al.   CELL RESEARCH

Parallel domestication of the Shattering1 genes in cereals

(2012) Zhongwei Lin et al.   NATURE GENETICS

Control of grain size, shape and quality by OsSPL16 in rice

(2012) Shaokui Wang et al.   NATURE GENETICS

Rare allele of OsPPKL1 associated with grain length causes extra-large grain and a significant yield increase in rice

(2012) X. Zhang et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Analyses of two rice (Oryza sativa) cyclin-dependent kinase inhibitors and effects of transgenic expression of OsiICK6 on plant growth and development

(2011) Ruifang Yang et al.   ANNALS OF BOTANY

The variant call format and VCFtools

(2011) P. Danecek et al.   BIOINFORMATICS

Natural variation in GS5 plays an important role in regulating grain size and yield in rice

(2011) Yibo Li et al.   NATURE GENETICS

Arabidopsis PCR2 Is a Zinc Exporter Involved in Both Zinc Extrusion and Long-Distance Zinc Transport

(2010) W.-Y. Song et al.   PLANT CELL

Cell Number Regulator1Affects Plant and Organ Size in Maize: Implications for Crop Yield Enhancement and Heterosis

(2010) Mei Guo et al.   PLANT CELL

A member of the highly conserved FWL (tomato FW2.2-like) gene family is essential for soybean nodule organogenesis

(2010) Marc Libault et al.   PLANT JOURNAL

A proposed conserved role for an avocado fw2.2-like gene as a negative regulator of fruit cell division

(2010) Yardena Dahan et al.   PLANTA

FastTree 2 – Approximately Maximum-Likelihood Trees for Large Alignments

(2010) Morgan N. Price et al.   PLoS One

Linking differential domain functions of the GS3 protein to natural variation of grain size in rice

(2010) H. Mao et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The Sequence Alignment/Map format and SAMtools

(2009) H. Li et al.   BIOINFORMATICS

Fast and accurate short read alignment with Burrows-Wheeler transform

(2009) H. Li et al.   BIOINFORMATICS