OryzaGenome: Genome Diversity Database of WildOryzaSpecies

Rapid turnover of antimicrobial-type cysteine-rich protein genes in closely related Oryza genomes

(2015) Matthew R. Shenton et al.   MOLECULAR GENETICS AND GENOMICS

Construction of Pseudomolecule Sequences of the aus Rice Cultivar Kasalath for Comparative Genomics of Asian Cultivated Rice

(2014) H. Sakai et al.   DNA RESEARCH

The genome sequence of African rice (Oryza glaberrima) and evidence for independent domestication

(2014) Muhua Wang et al.   NATURE GENETICS

Plant Omics Data Center: An Integrated Web Repository for Interspecies Gene Expression Networks with NLP-Based Curation

(2014) Hajime Ohyanagi et al.   PLANT AND CELL PHYSIOLOGY

Rapid diversification of fiveOryzaAA genomes associated with rice adaptation

(2014) Qun-Jie Zhang et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Rice Annotation Project Database (RAP-DB): An Integrative and Interactive Database for Rice Genomics

(2013) Hiroaki Sakai et al.   PLANT AND CELL PHYSIOLOGY

Whole-genome sequencing of Oryza brachyantha reveals mechanisms underlying Oryza genome evolution

(2013) Jinfeng Chen et al.   Nature Communications

Next-generation sequencing applications for wheat crop improvement

(2012) Paul J. Berkman et al.   AMERICAN JOURNAL OF BOTANY

A map of rice genome variation reveals the origin of cultivated rice

(2012) Xuehui Huang et al.   NATURE

RiceXPro Version 3.0: expanding the informatics resource for rice transcriptome

(2012) Yutaka Sato et al.   NUCLEIC ACIDS RESEARCH

OryzaPG-DB: Rice Proteome Database based on Shotgun Proteogenomics

(2011) Mohamed Helmy et al.   BMC PLANT BIOLOGY

Rice TOGO Browser: A Platform to Retrieve Integrated Information on Rice Functional and Applied Genomics

(2011) Yoshiaki Nagamura et al.   PLANT AND CELL PHYSIOLOGY

Genome-wide association studies of 14 agronomic traits in rice landraces

(2010) Xuehui Huang et al.   NATURE GENETICS

OryzaExpress: An Integrated Database of Gene Expression Networks and Omics Annotations in Rice

(2010) Kazuki Hamada et al.   PLANT AND CELL PHYSIOLOGY

Rice Expression Atlas In Reproductive Development

(2010) Masahiro Fujita et al.   PLANT AND CELL PHYSIOLOGY

The Sequence Alignment/Map format and SAMtools

(2009) H. Li et al.   BIOINFORMATICS

Fast and accurate short read alignment with Burrows-Wheeler transform

(2009) H. Li et al.   BIOINFORMATICS