Femtosecond-to-millisecond structural changes in a light-driven sodium pump
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Title
Femtosecond-to-millisecond structural changes in a light-driven sodium pump
Authors
Keywords
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Journal
NATURE
Volume -, Issue -, Pages -
Publisher
Springer Science and Business Media LLC
Online
2020-05-21
DOI
10.1038/s41586-020-2307-8
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Note: Only part of the references are listed.- The primary structural photoresponse of phytochrome proteins captured by a femtosecond X-ray laser
- (2020) Elin Claesson et al. eLife
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- (2020) Cecilia Wickstrand et al. Structural Dynamics-US
- The Two-Photon Reversible Reaction of the Bistable Jumping Spider Rhodopsin-1
- (2019) David Ehrenberg et al. BIOPHYSICAL JOURNAL
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- (2019) Arend Vogt et al. BIOPHYSICAL JOURNAL
- Distortion and a Strong Hydrogen Bond in the Retinal Chromophore Enable Sodium-Ion Transport by the Sodium-Ion Pump KR2
- (2019) Nao Nishimura et al. JOURNAL OF PHYSICAL CHEMISTRY B
- Structure and mechanisms of sodium-pumping KR2 rhodopsin
- (2019) Kirill Kovalev et al. Science Advances
- Proton uptake mechanism in bacteriorhodopsin captured by serial synchrotron crystallography
- (2019) Tobias Weinert et al. SCIENCE
- Three-dimensional view of ultrafast dynamics in photoexcited bacteriorhodopsin
- (2019) Gabriela Nass Kovacs et al. Nature Communications
- Cryo-EM, XFELs and the structure conundrum in structural biology
- (2019) Abbas Ourmazd NATURE METHODS
- XGANDALF – extended gradient descent algorithm for lattice finding
- (2019) Yaroslav Gevorkov et al. Acta Crystallographica A-Foundation and Advances
- Light-Driven Sodium-Pumping Rhodopsin: A New Concept of Active Transport
- (2018) Hideki Kandori et al. CHEMICAL REVIEWS
- Origin of the Reactive and Nonreactive Excited States in the Primary Reaction of Rhodopsins: pH Dependence of Femtosecond Absorption of Light-Driven Sodium Ion Pump Rhodopsin KR2
- (2018) Shinya Tahara et al. JOURNAL OF PHYSICAL CHEMISTRY B
- Solid-state NMR analysis of the sodium pump Krokinobacter rhodopsin 2 and its H30A mutant
- (2018) Jagdeep Kaur et al. JOURNAL OF STRUCTURAL BIOLOGY
- Time-resolved FTIR study of light-driven sodium pump rhodopsins
- (2018) Hui-Fen Chen et al. PHYSICAL CHEMISTRY CHEMICAL PHYSICS
- Retinal isomerization in bacteriorhodopsin captured by a femtosecond x-ray laser
- (2018) Przemyslaw Nogly et al. SCIENCE
- Protein dynamics observed by tunable mid-IR quantum cascade lasers across the time range from 10 ns to 1 s
- (2018) Bernd-Joachim Schultz et al. SPECTROCHIMICA ACTA PART A-MOLECULAR AND BIOMOLECULAR SPECTROSCOPY
- Energetics and dynamics of a light-driven sodium-pumping rhodopsin
- (2017) Carl-Mikael Suomivuori et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- CheckMyMetal: a macromolecular metal-binding validation tool
- (2017) Heping Zheng et al. Acta Crystallographica Section D-Structural Biology
- SwissFEL: The Swiss X-ray Free Electron Laser
- (2017) Christopher Milne et al. Applied Sciences-Basel
- Role of Asn112 in a Light-Driven Sodium Ion-Pumping Rhodopsin
- (2016) Rei Abe-Yoshizumi et al. BIOCHEMISTRY
- The photochemistry of sodium ion pump rhodopsin observed by watermarked femto- to submillisecond stimulated Raman spectroscopy
- (2016) Yusaku Hontani et al. PHYSICAL CHEMISTRY CHEMICAL PHYSICS
- Femtosecond structural dynamics drives the trans/cis isomerization in photoactive yellow protein
- (2016) K. Pande et al. SCIENCE
- A three-dimensional movie of structural changes in bacteriorhodopsin
- (2016) Eriko Nango et al. SCIENCE
- TakeTwo: an indexing algorithm suited to still images with known crystal parameters
- (2016) Helen Mary Ginn et al. Acta Crystallographica Section D-Structural Biology
- Recent developments inCrystFEL
- (2016) Thomas A. White et al. JOURNAL OF APPLIED CRYSTALLOGRAPHY
- A Chimera Na+-Pump Rhodopsin as an Effective Optogenetic Silencer
- (2016) Mohammad Razuanul Hoque et al. PLoS One
- The Role of the NDQ Motif in Sodium-Pumping Rhodopsins
- (2015) Keiichi Inoue et al. ANGEWANDTE CHEMIE-INTERNATIONAL EDITION
- Sodium-glucose cotransport
- (2015) Søren Brandt Poulsen et al. CURRENT OPINION IN NEPHROLOGY AND HYPERTENSION
- Structure of the light-driven sodium pump KR2 and its implications for optogenetics
- (2015) Ivan Gushchin et al. FEBS Journal
- ff14SB: Improving the Accuracy of Protein Side Chain and Backbone Parameters from ff99SB
- (2015) James A. Maier et al. Journal of Chemical Theory and Computation
- Ultrafast Photoreaction Dynamics of a Light-Driven Sodium-Ion-Pumping Retinal Protein from Krokinobacter eikastus Revealed by Femtosecond Time-Resolved Absorption Spectroscopy
- (2015) Shinya Tahara et al. Journal of Physical Chemistry Letters
- Mutant of a Light-Driven Sodium Ion Pump Can Transport Cesium Ions
- (2015) Masae Konno et al. Journal of Physical Chemistry Letters
- Kinetic Analysis of H+–Na+ Selectivity in a Light-Driven Na+-Pumping Rhodopsin
- (2015) Yoshitaka Kato et al. Journal of Physical Chemistry Letters
- Structural basis for Na+ transport mechanism by a light-driven Na+ pump
- (2015) Hideaki E. Kato et al. NATURE
- Optogenetics: 10 years of microbial opsins in neuroscience
- (2015) Karl Deisseroth NATURE NEUROSCIENCE
- Crystal structure of a light-driven sodium pump
- (2015) Ivan Gushchin et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
- Direct observation of ultrafast collective motions in CO myoglobin upon ligand dissociation
- (2015) T. R. M. Barends et al. SCIENCE
- Crystal structure of a light-driven sodium pump
- (2015) Ivan Gushchin et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
- Light-Driven Na+ Pump from Gillisia limnaea: A High-Affinity Na+ Binding Site Is Formed Transiently in the Photocycle
- (2014) Sergei P. Balashov et al. BIOCHEMISTRY
- Time-resolved serial crystallography captures high-resolution intermediates of photoactive yellow protein
- (2014) Jason Tenboer et al. SCIENCE
- Lipidic cubic phase injector facilitates membrane protein serial femtosecond crystallography
- (2014) Uwe Weierstall et al. Nature Communications
- The role of protein-bound water molecules in microbial rhodopsins
- (2013) Klaus Gerwert et al. BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS
- A simplified Tamm-Dancoff density functional approach for the electronic excitation spectra of very large molecules
- (2013) Stefan Grimme JOURNAL OF CHEMICAL PHYSICS
- Transient protonation changes in channelrhodopsin-2 and their relevance to channel gating
- (2013) V. A. Lorenz-Fonfria et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- A light-driven sodium ion pump in marine bacteria
- (2013) Keiichi Inoue et al. Nature Communications
- ChemShell-a modular software package for QM/MM simulations
- (2013) Sebastian Metz et al. Wiley Interdisciplinary Reviews-Computational Molecular Science
- Coordination to divalent cations by calcium-binding proteins studied by FTIR spectroscopy
- (2012) Masayuki Nara et al. BIOCHIMICA ET BIOPHYSICA ACTA-BIOMEMBRANES
- CrystFEL: a software suite for snapshot serial crystallography
- (2012) Thomas A. White et al. JOURNAL OF APPLIED CRYSTALLOGRAPHY
- CAVER 3.0: A Tool for the Analysis of Transport Pathways in Dynamic Protein Structures
- (2012) Eva Chovancova et al. PLoS Computational Biology
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- (2011) Stefan Grimme et al. JOURNAL OF COMPUTATIONAL CHEMISTRY
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- (2009) Hans Martin Senn et al. ANGEWANDTE CHEMIE-INTERNATIONAL EDITION
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- (2008) Heping Zheng et al. JOURNAL OF INORGANIC BIOCHEMISTRY
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