CheckMyMetal: a macromolecular metal-binding validation tool

19 F NMR and DFT Analysis Reveal Structural and Electronic Transition State Features for RhoA-Catalyzed GTP Hydrolysis

(2016) Yi Jin et al.   ANGEWANDTE CHEMIE-INTERNATIONAL EDITION

Role of Calcium in Secondary Structure Stabilization during Maturation of Nitrous Oxide Reductase

(2016) Lisa K. Schneider et al.   BIOCHEMISTRY

Prior knowledge or freedom of interpretation? A critical look at a recently published classification of “novel” Zn binding sites

(2016) Joanna E Raczynska et al.   PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS

Circulatory zinc transport is controlled by distinct interdomain sites on mammalian albumins

(2016) Katarzyna B. Handing et al.   Chemical Science

Validation and correction of Zn–CysxHisycomplexes

(2016) Wouter G. Touw et al.   Acta Crystallographica Section D-Structural Biology

Magnesium-binding architectures in RNA crystal structures: validation, binding preferences, classification and motif detection

(2015) Heping Zheng et al.   NUCLEIC ACIDS RESEARCH

A less-biased analysis of metalloproteins reveals novel zinc coordination geometries

(2015) Sen Yao et al.   PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS

Crystallography and chemistry should always go together: a cautionary tale of protein complexes with cisplatin and carboplatin

(2015) Ivan Shabalin et al.   ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY

Tools for macromolecular model building and refinement into electron cryo-microscopy reconstructions

(2015) Alan Brown et al.   ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY

Traffic within the Cytochrome b 6 f Lipoprotein Complex: Gating of the Quinone Portal

(2014) S. Saif Hasan et al.   BIOPHYSICAL JOURNAL

Copper Active Sites in Biology

(2014) Edward I. Solomon et al.   CHEMICAL REVIEWS

Enzymatic “tricks”: Carboxylate shift and sulfur shift

(2014) Sérgio F. Sousa et al.   INTERNATIONAL JOURNAL OF QUANTUM CHEMISTRY

 -Fluorophosphonates reveal how a phosphomutase conserves transition state conformation over hexose recognition in its two-step reaction

(2014) Y. Jin et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Avoidable errors in deposited macromolecular structures: an impediment to efficient data mining

(2014) Zbigniew Dauter et al.   IUCrJ

Validation of metal-binding sites in macromolecular structures with the CheckMyMetal web server

(2013) Heping Zheng et al.   Nature Protocols

Structural characterization of Helicobacter pylori dethiobiotin synthetase reveals differences between family members

(2012) Przemyslaw J. Porebski et al.   FEBS Journal

Local structure and dynamics of hemeproteins by X-ray absorption near edge structure spectroscopy

(2012) Alessandro Arcovito et al.   JOURNAL OF INORGANIC BIOCHEMISTRY

Metals in protein structures: a review of their principal features

(2010) Marjorie M. Harding et al.   Crystallography Reviews

A Short, Strong Hydrogen Bond in the Active Site of Human Carbonic Anhydrase II

(2009) Balendu Sankara Avvaru et al.   BIOCHEMISTRY

Factors Governing Metal−Ligand Distances and Coordination Geometries of Metal Complexes

(2009) Gopi Kuppuraj et al.   JOURNAL OF PHYSICAL CHEMISTRY B

Crystal structure and molecular modeling study of N-carbamoylsarcosine amidase Ta0454 from Thermoplasma acidophilum

(2009) Hai-Bin Luo et al.   JOURNAL OF STRUCTURAL BIOLOGY

Biological X-ray absorption spectroscopy and metalloproteomics

(2009) Isabella Ascone et al.   JOURNAL OF SYNCHROTRON RADIATION

Crystal Structures of Cisplatin Bound to a Human Copper Chaperone

(2009) Amie K. Boal et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

Data mining of metal ion environments present in protein structures

(2008) Heping Zheng et al.   JOURNAL OF INORGANIC BIOCHEMISTRY