Computational inference of the structure and regulation of the lignin pathway in Panicum virgatum
Published 2015 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
Computational inference of the structure and regulation of the lignin pathway in Panicum virgatum
Authors
Keywords
Biochemical systems theory, Lignin biosynthesis, <em class=EmphasisTypeItalic >Panicum virgatum</em>, Pathway analysis, Recalcitrance, Switchgrass
Journal
Biotechnology for Biofuels
Volume 8, Issue 1, Pages -
Publisher
Springer Nature
Online
2015-09-18
DOI
10.1186/s13068-015-0334-8
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- 4-Coumaroyl and Caffeoyl Shikimic Acids Inhibit 4-Coumaric Acid:Coenzyme A Ligases and Modulate Metabolic Flux for 3-Hydroxylation in Monolignol Biosynthesis of Populus trichocarpa
- (2015) Chien-Yuan Lin et al. Molecular Plant
- Systems Biology of Lignin Biosynthesis inPopulus trichocarpa: Heteromeric 4-Coumaric Acid:Coenzyme A Ligase Protein Complex Formation, Regulation, and Numerical Modeling
- (2014) Hsi-Chuan Chen et al. PLANT CELL
- Complete Proteomic-Based Enzyme Reaction and Inhibition Kinetics Reveal How Monolignol Biosynthetic Enzyme Families Affect Metabolic Flux and Lignin inPopulus trichocarpa
- (2014) Jack P. Wang et al. PLANT CELL
- Enhanced characteristics of genetically modified switchgrass (Panicum virgatum L.) for high biofuel production
- (2013) Hui Shen et al. Biotechnology for Biofuels
- Glycerol carbonate as green solvent for pretreatment of sugarcane bagasse
- (2013) Zhanying Zhang et al. Biotechnology for Biofuels
- A Genomics Approach to Deciphering Lignin Biosynthesis in Switchgrass
- (2013) H. Shen et al. PLANT CELL
- Early lignin pathway enzymes and routes to chlorogenic acid in switchgrass (Panicum virgatum L.)
- (2013) Luis L. Escamilla-Treviño et al. PLANT MOLECULAR BIOLOGY
- Caffeoyl Shikimate Esterase (CSE) Is an Enzyme in the Lignin Biosynthetic Pathway in Arabidopsis
- (2013) R. Vanholme et al. SCIENCE
- Down-regulation of the caffeic acid O-methyltransferase gene in switchgrass reveals a novel monolignol analog
- (2012) Timothy J Tschaplinski et al. Biotechnology for Biofuels
- Protein-Protein and Protein-Membrane Associations in the Lignin Pathway
- (2012) J.-E. Bassard et al. PLANT CELL
- Functional Analysis of Metabolic Channeling and Regulation in Lignin Biosynthesis: A Computational Approach
- (2012) Yun Lee et al. PLoS Computational Biology
- Downregulation of Cinnamyl Alcohol Dehydrogenase (CAD) Leads to Improved Saccharification Efficiency in Switchgrass
- (2011) Chunxiang Fu et al. BioEnergy Research
- Silencing of 4-coumarate:coenzyme A ligase in switchgrass leads to reduced lignin content and improved fermentable sugar yields for biofuel production
- (2011) Bin Xu et al. NEW PHYTOLOGIST
- Functional characterization of the switchgrass (Panicum virgatum) R2R3-MYB transcription factor PvMYB4 for improvement of lignocellulosic feedstocks
- (2011) Hui Shen et al. NEW PHYTOLOGIST
- Independent Recruitment of an O-Methyltransferase for Syringyl Lignin Biosynthesis in Selaginella moellendorffii
- (2011) J.-K. Weng et al. PLANT CELL
- Genetic manipulation of lignin reduces recalcitrance and improves ethanol production from switchgrass
- (2011) Chunxiang Fu et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Integrative Analysis of Transgenic Alfalfa (Medicago sativa L.) Suggests New Metabolic Control Mechanisms for Monolignol Biosynthesis
- (2011) Yun Lee et al. PLoS Computational Biology
- Measuring enzyme activities under standardized in vivo-like conditions for systems biology
- (2010) Karen van Eunen et al. FEBS Journal
- Mathematical modeling of monolignol biosynthesis in Populus xylem
- (2010) Yun Lee et al. MATHEMATICAL BIOSCIENCES
- What is flux balance analysis?
- (2010) Jeffrey D Orth et al. NATURE BIOTECHNOLOGY
- Convergent Evolution of Syringyl Lignin Biosynthesis via Distinct Pathways in the LycophyteSelaginellaand Flowering Plants
- (2010) Jing-Ke Weng et al. PLANT CELL
- Distinct cinnamoyl CoA reductases involved in parallel routes to lignin inMedicago truncatula
- (2010) Rui Zhou et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Kinetic hybrid models composed of mechanistic and simplified enzymatic rate laws - a promising method for speeding up the kinetic modelling of complex metabolic networks
- (2009) Sascha Bulik et al. FEBS Journal
- Production of first and second generation biofuels: A comprehensive review
- (2009) S.N. Naik et al. RENEWABLE & SUSTAINABLE ENERGY REVIEWS
- Independent origins of syringyl lignin in vascular plants
- (2008) J.-K. Weng et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
Find Funding. Review Successful Grants.
Explore over 25,000 new funding opportunities and over 6,000,000 successful grants.
ExploreDiscover Peeref hubs
Discuss science. Find collaborators. Network.
Join a conversation