Computational inference of the structure and regulation of the lignin pathway in Panicum virgatum

4-Coumaroyl and Caffeoyl Shikimic Acids Inhibit 4-Coumaric Acid:Coenzyme A Ligases and Modulate Metabolic Flux for 3-Hydroxylation in Monolignol Biosynthesis of Populus trichocarpa

(2015) Chien-Yuan Lin et al.   Molecular Plant

Systems Biology of Lignin Biosynthesis inPopulus trichocarpa: Heteromeric 4-Coumaric Acid:Coenzyme A Ligase Protein Complex Formation, Regulation, and Numerical Modeling

(2014) Hsi-Chuan Chen et al.   PLANT CELL

Complete Proteomic-Based Enzyme Reaction and Inhibition Kinetics Reveal How Monolignol Biosynthetic Enzyme Families Affect Metabolic Flux and Lignin inPopulus trichocarpa

(2014) Jack P. Wang et al.   PLANT CELL

Enhanced characteristics of genetically modified switchgrass (Panicum virgatum L.) for high biofuel production

(2013) Hui Shen et al.   Biotechnology for Biofuels

Glycerol carbonate as green solvent for pretreatment of sugarcane bagasse

(2013) Zhanying Zhang et al.   Biotechnology for Biofuels

A Genomics Approach to Deciphering Lignin Biosynthesis in Switchgrass

(2013) H. Shen et al.   PLANT CELL

Early lignin pathway enzymes and routes to chlorogenic acid in switchgrass (Panicum virgatum L.)

(2013) Luis L. Escamilla-Treviño et al.   PLANT MOLECULAR BIOLOGY

Caffeoyl Shikimate Esterase (CSE) Is an Enzyme in the Lignin Biosynthetic Pathway in Arabidopsis

(2013) R. Vanholme et al.   SCIENCE

Down-regulation of the caffeic acid O-methyltransferase gene in switchgrass reveals a novel monolignol analog

(2012) Timothy J Tschaplinski et al.   Biotechnology for Biofuels

Protein-Protein and Protein-Membrane Associations in the Lignin Pathway

(2012) J.-E. Bassard et al.   PLANT CELL

Functional Analysis of Metabolic Channeling and Regulation in Lignin Biosynthesis: A Computational Approach

(2012) Yun Lee et al.   PLoS Computational Biology

Downregulation of Cinnamyl Alcohol Dehydrogenase (CAD) Leads to Improved Saccharification Efficiency in Switchgrass

(2011) Chunxiang Fu et al.   BioEnergy Research

Silencing of 4-coumarate:coenzyme A ligase in switchgrass leads to reduced lignin content and improved fermentable sugar yields for biofuel production

(2011) Bin Xu et al.   NEW PHYTOLOGIST

Functional characterization of the switchgrass (Panicum virgatum) R2R3-MYB transcription factor PvMYB4 for improvement of lignocellulosic feedstocks

(2011) Hui Shen et al.   NEW PHYTOLOGIST

Independent Recruitment of an O-Methyltransferase for Syringyl Lignin Biosynthesis in Selaginella moellendorffii

(2011) J.-K. Weng et al.   PLANT CELL

Genetic manipulation of lignin reduces recalcitrance and improves ethanol production from switchgrass

(2011) Chunxiang Fu et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Integrative Analysis of Transgenic Alfalfa (Medicago sativa L.) Suggests New Metabolic Control Mechanisms for Monolignol Biosynthesis

(2011) Yun Lee et al.   PLoS Computational Biology

Measuring enzyme activities under standardized in vivo-like conditions for systems biology

(2010) Karen van Eunen et al.   FEBS Journal

Mathematical modeling of monolignol biosynthesis in Populus xylem

(2010) Yun Lee et al.   MATHEMATICAL BIOSCIENCES

What is flux balance analysis?

(2010) Jeffrey D Orth et al.   NATURE BIOTECHNOLOGY

Convergent Evolution of Syringyl Lignin Biosynthesis via Distinct Pathways in the LycophyteSelaginellaand Flowering Plants

(2010) Jing-Ke Weng et al.   PLANT CELL

Distinct cinnamoyl CoA reductases involved in parallel routes to lignin inMedicago truncatula

(2010) Rui Zhou et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Kinetic hybrid models composed of mechanistic and simplified enzymatic rate laws - a promising method for speeding up the kinetic modelling of complex metabolic networks

(2009) Sascha Bulik et al.   FEBS Journal

Production of first and second generation biofuels: A comprehensive review

(2009) S.N. Naik et al.   RENEWABLE & SUSTAINABLE ENERGY REVIEWS

Independent origins of syringyl lignin in vascular plants

(2008) J.-K. Weng et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA